Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq586 176 6e-39 seq405 107 3e-18 >seq586 Length=168373 Score = 176 bits (194), Expect = 6e-39 Identities = 473/722 (66%), Gaps = 6/722 (1%) Strand=Plus/Plus Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576 || || ||||| || ||||||| |||| ||||| |||||| || || | || | | Sbjct 81215 TCAAACTCATCACCATAAACATCTGCCAAACCAGGGGCTTCATTGGGGCAGAACAGAGTC 81274 Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAG 69636 || || | | || |||||| ||||| || ||||| || |||| || || || Sbjct 81275 CAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGCGCGTAGAAC 81334 Query 69637 AGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATA 69696 ||||| | || ||| ||| || || || || || |||||| || ||||| | Sbjct 81335 AGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAGGAACTCGAAG 81394 Query 69697 ATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCC 69756 ||||| | |||||| || || || || || || | | || || || || || |||||| Sbjct 81395 ATATCGGCATGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTGTTACCTCCC 81454 Query 69757 TGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGAT 69816 || || | || || |||||||| || | || | ||||| |||| |||||| ||||| Sbjct 81455 TGGTCGACATACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAG 81514 Query 69817 TTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCT 69876 ||||| || ||| ||| || ||| | || || || || || || Sbjct 81515 GACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGGCCG 81574 Query 69877 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCT 69936 || || || || | || ||||| | |||||| || | ||||| || |||||||| Sbjct 81575 ATACCGCCAGCTGTCTTCGAGATCATGGCACAAGTCTTAAGGGTGTCGTAGATACCCTCA 81634 Query 69937 ATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGAC---ATTTGATGATGTATAGTT 69993 |||||||| || |||| | | || || || |||| | || | || ||| Sbjct 81635 ATGCTATCCTCCTTCATATCGACGAGGAAGCA---AGACGCAAGCTGGGGTTGGGGAGTA 81691 Query 69994 CCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTAT 70053 || ||||| || | |||||||| || |||||||| |||| | ||| | || | ||| Sbjct 81692 CCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTAG 81751 Query 70054 GTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATA 70113 || ||||| || ||| |||| |||||| || | ||| ||||||||||||| Sbjct 81752 GTCTCAATGGCCTTTTCAATATTGTTGCCATGAATGCCAACCGCAACACGCATCAACAAG 81811 Query 70114 TGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTT 70173 ||||| || || || | || ||| ||| || |||||| || || || || Sbjct 81812 TGCTGCGGACGCTCAGCAACCTTGCCATTGATTCGCAGCAGGTAGGACCGCTCGAGTGTC 81871 Query 70174 TTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTA 70233 || || || ||| ||||||| ||||| | || || | |||| |||| || || | | Sbjct 81872 TTGAAACCGAAAAAGTTGTAGTTGAAGTCACGATCATATACAATAGCAGAGTTGAGCTCA 81931 Query 70234 TC 70235 || Sbjct 81932 TC 81933 >seq405 Length=35189 Score = 107 bits (118), Expect = 3e-18 Identities = 336/515 (65%), Gaps = 9/515 (2%) Strand=Plus/Minus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 || ||||| |||||||| || ||||| || || || || || ||| | | || ||| || Sbjct 2919 TTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTCGTCTTTCCTGCAAGCGAGATACTT 2860 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 |||||||| || || || || | | || | | || || ||| | | | | Sbjct 2859 TCCATGAAGTCGAAGGGGTTGGGAGAGTTGAAGTACTTCTTGTTTCCAAGAGCAACCAAC 2800 Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505 | | ||| ||||| || || || || ||| | | | | ||||| || | ||| Sbjct 2799 AGCCGATCAGCAACGAACTCAATATACTGGCACATTAGCTTAGAGTTCATGCCCAGGAGA 2740 Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCT--GTTATTA 39563 ||| || ||||| || || | ||||| | ||| ||| | || ||||| | || || Sbjct 2739 GCAACAGGAAGAGCGTCTGTCAAGAACTCCTGTTCAATGGCCACAGCCTCAACGATAATA 2680 Query 39564 TCGATGTTACTACCTCATCACTCGGTG-GATGCAATAAATGTTTAAACATTAAGCAGGCG 39622 || || |||| | |||| | |||| || || ||| | | ||| || Sbjct 2679 TCCTCAATA--ACCTTCTTG-TCGGGGCGATGGTTCAAGTGAGAAAAGAGAAGGCAAGCA 2623 Query 39623 AAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGC 39682 ||||| ||||| ||||| || | | || | ||||| || || ||||| |||||| Sbjct 2622 AAGTCTGTGTGTAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCAGGC 2563 Query 39683 ATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCT 39742 || | |||||||| || ||||| || |||| ||||||||||||||| || ||||| || Sbjct 2562 ATCAAGCCACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAAAAGATTCCC 2503 Query 39743 TCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTAT---GTATCCAC 39799 || || || || || || ||||| | || || || | | || |||| ||||| Sbjct 2502 TCCACAGCGGCGAAGGCCACAAGGCGCTGAGCGAAAGTAGATTCCTTATCAGAAATCCAT 2443 Query 39800 TTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGG 39834 || ||||| | || |||||| | | |||||| Sbjct 2442 CTCATGGCCCACTGGGCCTTCTTCCTGATACAAGG 2408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686903038552440