Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20var._20RP-
2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq586 176 6e-39
seq405 107 3e-18
>seq586
Length=168373
Score = 176 bits (194), Expect = 6e-39
Identities = 473/722 (66%), Gaps = 6/722 (1%)
Strand=Plus/Plus
Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576
|| || ||||| || ||||||| |||| ||||| |||||| || || | || | |
Sbjct 81215 TCAAACTCATCACCATAAACATCTGCCAAACCAGGGGCTTCATTGGGGCAGAACAGAGTC 81274
Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAG 69636
|| || | | || |||||| ||||| || ||||| || |||| || || ||
Sbjct 81275 CAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGCGCGTAGAAC 81334
Query 69637 AGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATA 69696
||||| | || ||| ||| || || || || || |||||| || ||||| |
Sbjct 81335 AGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAGGAACTCGAAG 81394
Query 69697 ATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCC 69756
||||| | |||||| || || || || || || | | || || || || || ||||||
Sbjct 81395 ATATCGGCATGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTGTTACCTCCC 81454
Query 69757 TGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGAT 69816
|| || | || || |||||||| || | || | ||||| |||| |||||| |||||
Sbjct 81455 TGGTCGACATACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAG 81514
Query 69817 TTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCT 69876
||||| || ||| ||| || ||| | || || || || || ||
Sbjct 81515 GACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGGCCG 81574
Query 69877 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCT 69936
|| || || || | || ||||| | |||||| || | ||||| || ||||||||
Sbjct 81575 ATACCGCCAGCTGTCTTCGAGATCATGGCACAAGTCTTAAGGGTGTCGTAGATACCCTCA 81634
Query 69937 ATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGAC---ATTTGATGATGTATAGTT 69993
|||||||| || |||| | | || || || |||| | || | || |||
Sbjct 81635 ATGCTATCCTCCTTCATATCGACGAGGAAGCA---AGACGCAAGCTGGGGTTGGGGAGTA 81691
Query 69994 CCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTAT 70053
|| ||||| || | |||||||| || |||||||| |||| | ||| | || | |||
Sbjct 81692 CCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTAG 81751
Query 70054 GTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATA 70113
|| ||||| || ||| |||| |||||| || | ||| |||||||||||||
Sbjct 81752 GTCTCAATGGCCTTTTCAATATTGTTGCCATGAATGCCAACCGCAACACGCATCAACAAG 81811
Query 70114 TGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTT 70173
||||| || || || | || ||| ||| || |||||| || || || ||
Sbjct 81812 TGCTGCGGACGCTCAGCAACCTTGCCATTGATTCGCAGCAGGTAGGACCGCTCGAGTGTC 81871
Query 70174 TTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTA 70233
|| || || ||| ||||||| ||||| | || || | |||| |||| || || | |
Sbjct 81872 TTGAAACCGAAAAAGTTGTAGTTGAAGTCACGATCATATACAATAGCAGAGTTGAGCTCA 81931
Query 70234 TC 70235
||
Sbjct 81932 TC 81933
>seq405
Length=35189
Score = 107 bits (118), Expect = 3e-18
Identities = 336/515 (65%), Gaps = 9/515 (2%)
Strand=Plus/Minus
Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385
|| ||||| |||||||| || ||||| || || || || || ||| | | || ||| ||
Sbjct 2919 TTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTCGTCTTTCCTGCAAGCGAGATACTT 2860
Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445
|||||||| || || || || | | || | | || || ||| | | | |
Sbjct 2859 TCCATGAAGTCGAAGGGGTTGGGAGAGTTGAAGTACTTCTTGTTTCCAAGAGCAACCAAC 2800
Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505
| | ||| ||||| || || || || ||| | | | | ||||| || | |||
Sbjct 2799 AGCCGATCAGCAACGAACTCAATATACTGGCACATTAGCTTAGAGTTCATGCCCAGGAGA 2740
Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCT--GTTATTA 39563
||| || ||||| || || | ||||| | ||| ||| | || ||||| | || ||
Sbjct 2739 GCAACAGGAAGAGCGTCTGTCAAGAACTCCTGTTCAATGGCCACAGCCTCAACGATAATA 2680
Query 39564 TCGATGTTACTACCTCATCACTCGGTG-GATGCAATAAATGTTTAAACATTAAGCAGGCG 39622
|| || |||| | |||| | |||| || || ||| | | ||| ||
Sbjct 2679 TCCTCAATA--ACCTTCTTG-TCGGGGCGATGGTTCAAGTGAGAAAAGAGAAGGCAAGCA 2623
Query 39623 AAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGC 39682
||||| ||||| ||||| || | | || | ||||| || || ||||| ||||||
Sbjct 2622 AAGTCTGTGTGTAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCAGGC 2563
Query 39683 ATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCT 39742
|| | |||||||| || ||||| || |||| ||||||||||||||| || ||||| ||
Sbjct 2562 ATCAAGCCACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAAAAGATTCCC 2503
Query 39743 TCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTAT---GTATCCAC 39799
|| || || || || || ||||| | || || || | | || |||| |||||
Sbjct 2502 TCCACAGCGGCGAAGGCCACAAGGCGCTGAGCGAAAGTAGATTCCTTATCAGAAATCCAT 2443
Query 39800 TTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGG 39834
|| ||||| | || |||||| | | ||||||
Sbjct 2442 CTCATGGCCCACTGGGCCTTCTTCCTGATACAAGG 2408
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686903038552440
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