Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq630 118 9e-22 seq615 89.7 4e-13 >seq630 Length=388802 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| || |||| || | |||| ||| | || || || ||||| |||||||| || Sbjct 62572 TGCCACCACGCAGACGGAGGACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAATCAG 62513 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 || | | || | ||||| || || || || || | ||||||||||||||||| || | Sbjct 62512 ACAAGGTACGGCCATCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCAGGAG 62453 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | |||||| ||||| ||||||| | || | | || | ||||||| | || | Sbjct 62452 GGATACCCTCCTTATCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCTA 62393 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 |||||| || |||| || ||||| ||||| || || |||||||||||| Sbjct 62392 CTTCTAATGTGATAGTCTTTCCCGTGAGAGTCTTAACGAAGATTTGCATA 62343 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| |||| |||| || | ||| || |||||||||||||| ||| Sbjct 62798 CCACCACGCAGACGCAGCACCAGGTGGAGCGTGCTCTCCTTTTGAATATTGTAATCGGAG 62739 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | | | | ||||| | ||| ||||| ||| | ||||||||||| || || || || Sbjct 62738 AGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGG 62679 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || ||||||| | |||| | | || | ||||| | || || || Sbjct 62678 ATGCCCTCCTTGTCTTGGATCTTGCTCTTCACGTTGTCAATCGTGTCGGAGGACTCCACC 62619 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | || || || ||||| || || ||||| ||||| Sbjct 62618 TCCAGGGTAATGGTCTTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 62572 >seq615 Length=220600 Score = 89.7 bits (98), Expect = 4e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 27060 TTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATG 27119 || ||||| ||||||||||||| | |||| | || || ||||| ||||| ||| | || Sbjct 21219 TTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 21160 Query 27120 AGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCT 27179 || ||||| || || || || | |||||| || || ||||||| || | | | || Sbjct 21159 AGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 21100 Query 27180 ACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAA 27238 | ||||| | | ||||| || || || |||| || |||||||| || || || || Sbjct 21099 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATAGTCTTACCCGTCAGGGTCTTGACGAA 21041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424930924966152