Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq586 104 3e-17 >seq586 Length=168373 Score = 104 bits (114), Expect = 3e-17 Identities = 137/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 ||||| |||| || |||| ||||| ||||| || || | | ||||||| | Sbjct 80909 GGAAGCGCGAGAGAAGCCAGGTTGCAGACAGCAACTTCGTCAGGAGCACTGTACTCAATG 80968 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || || || | ||||| || ||| || |||| ||||| ||||| ||||||||| Sbjct 80969 ATCTCCGTGCAAAGATTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTCTTG 81028 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 ||||| ||||||||||| ||||| |||| | || ||||| ||||| | | |||||| Sbjct 81029 TTGCAGGCATCCTTGTAAAGCATAAAGGGGTTGCCAGTCTCGGTCTGAGCCTCAAGAATA 81088 Query 111410 GCCTTCCAAA 111419 || | ||||| Sbjct 81089 GCATACCAAA 81098 Score = 82.4 bits (90), Expect = 1e-10 Identities = 153/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||||||||| | ||||| || ||||| ||||| || |||| || || |||| Sbjct 80386 GTAGATGTTCGAGGTGTAAGGCTCAAAACATTCGTTGAAGCCCAGAATCTGGCTGGTGCT 80445 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826 || || ||||| ||||||| ||| | ||||||||||| ||| | || || | Sbjct 80446 TGCGGTGGGCATCGGTGCCACCAACAAACTGTTACGAACACCGTGCTGGGCAATCTTCGC 80505 Query 110827 CTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAG 110886 ||| ||| ||||||||| || | | ||| | |||||||| ||| |||| || Sbjct 80506 CTTCAGAGAATCCCAGTCCCAGAGGTCCGTGGGGGTTCTGTCCCACATATCATACTGGAG 80565 Query 110887 CACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACC 110931 | || || || |||| || ||||| |||||||||| | ||| Sbjct 80566 AATACCCTGAGAGACGGGGGAGCCCTCGTAGGTTTCATAAGGACC 80610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628026732381600