Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq405 118 1e-21 seq586 109 6e-19 seq619 89.7 6e-13 >seq405 Length=35189 Score = 118 bits (130), Expect = 1e-21 Identities = 164/226 (73%), Gaps = 8/226 (4%) Strand=Plus/Plus Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGTC 94790 |||||| ||||| ||||| || | ||||| |||| ||| || |||| | || Sbjct 2404 AGTTCCTTGTATCAGGAAGAAGGCCCAGTGGGCCATGAGATGGATTTCTGATAAGGAATC 2463 Query 94791 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 94850 | | || ||| |||| || | || || || ||| ||||| ||||| |||||||| Sbjct 2464 ---TACTTTCGCTCAGCGCCTTGTGGCCTTCGCCGCTGTGGAGGGAATCTTTTTCTCTGG 2520 Query 94851 TTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909 || || ||| | || | ||||| |||||||| || | ||||| |||||| |||| Sbjct 2521 ATCTTT-TGCTTCCATCTTCTGGCTGAAGAAGCGTGGCTTGATGCCTGGTCTCACTTTCT 2579 Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||||||||| |||||||||||||||||||| ||| ||| ||||| Sbjct 2580 CCAACGAGCTCATCTCTCGTGACGAGGGACTACACACAGACTTTGC 2625 >seq586 Length=168373 Score = 109 bits (120), Expect = 6e-19 Identities = 459/714 (64%), Gaps = 8/714 (1%) Strand=Plus/Minus Query 104888 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGAC 104947 ||| | |||||||| || |||| ||||||||||| | || | ||||||||||| || Sbjct 81096 TGGTATGCTATTCTTGAGGCTCAGACCGAGACTGGCAACCCCTTTATGCTTTACAAGGAT 81037 Query 104948 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGT 105007 ||||| ||| | ||||| || || ||||| |||| || || |||||||| || Sbjct 81036 GCCTGCAACAAGAAGAGCAACCAGAAGAACCTGGGAACTATTCGCAGCTCCAATCTTTGC 80977 Query 105008 ACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATC 105067 || || ||| | || | | | || || ||||| || ||||| || || || Sbjct 80976 ACGGAGATCATTGAGTACAGTGCTCCTGACGAAGTTGCTGTCTGCAACCTGGCTTCTCTC 80917 Query 105068 GCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATT-TGATTATGAAAAACTCCACGA 105126 || || || | | ||| || | | | || | | ||| | | || || ||||| Sbjct 80916 GCGCTTCCTACTTTTGTCGACGCGGCC-CGTGGAGAGTATGACTTCGGCAAGCTGCACGA 80858 Query 105127 AGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT 105186 ||| | | | ||| | |||| |||||||| ||| | ||||| || Sbjct 80857 GGTTGTGCAGGTCTTGGTTCGTAACTTGAACAAGATTATTGATGTAAACTACTACCCTGT 80798 Query 105187 TG-AGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTC 105245 | ||| | | | | | || ||| | ||||| || |||| ||| ||||| | ||| Sbjct 80797 TCCAGAGGCCAAGAAGAGC-AACATGCGGCACCGCCCCATTGCTCTTGGTGTCAATGGTT 80739 Query 105246 TCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATC 105304 | || |||| ||| || | || |||| | || || |||| |||||| | | | Sbjct 80738 TGGCCGATGCCTTCCTTGCCCTG-CGCCTGCCGTTCGACTCCGCCGAAGCAAGACAGCTA 80680 Query 105305 AATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAG-GCGAGTTCAGAGTTGGC 105363 || | || ||||||||||| ||||||| ||| |||| || || ||| |||| Sbjct 80679 AACATCCAGATCTTTGAGACCATCTATCACGGTGCT-TTGACTGCATCTTGTGAGCTGGC 80621 Query 105364 AGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCA 105423 ||| |||||| |||||||||| ||||| || || | || || || | || || Sbjct 80620 CAAGGAGTTTGGTCCTTATGAAACCTACGAGGGCTCCCCCGTCTCTCAGGGTATTCTCCA 80561 Query 105424 ATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGGGAAGCTCTCAAGGAACG 105483 | |||||||||||| | ||| | | || |||||||| |||| |||| Sbjct 80560 GTATGATATGTGGGACAGAACCCCCACGGACCTCTGGGACTGGGATTCTCTGAAGGCGAA 80501 Query 105484 CATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCAC 105543 || || | ||| ||||||||||| | | |||| || ||||| || || ||| Sbjct 80500 GATTGCCCAGCACGGTGTTCGTAACAGTTTGTTGGTGGCACCGATGCCCACCGCAAGCAC 80441 Query 105544 CGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA 105597 | || || |||| || ||||| ||||| || ||||| |||||||||| Sbjct 80440 CAGCCAGATTCTGGGCTTCAACGAATGTTTTGAGCCTTACACCTCGAACATCTA 80387 >seq619 Length=233136 Score = 89.7 bits (98), Expect = 6e-13 Identities = 216/325 (66%), Gaps = 19/325 (6%) Strand=Plus/Minus Query 9614 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9673 |||||||||||||| |||| | ||||| | || ||||| |||||||| || Sbjct 32487 AAACCATCCATCTCCGTCAGGATCTGGTTCAGGGTGCTCTCCCGCTCATCATTACCT--- 32431 Query 9674 ATACCACC--AGCACTGCGTTGCTTT-------CCCACGGCATCAATCTCATCAATGAAG 9724 |||| ||| ||| | ||| | || | ||||| || |||||||||||| Sbjct 32430 ---CCACTGAAGCTCTGTTTAGCTCTAGATTTACCAATAGCATCGATTTCATCAATGAAG 32374 Query 9725 ACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCC 9784 | |||||| || ||| | || ||| | || ||||| || ||||| | || Sbjct 32373 ATGATGCAAGGGGCATTCTTCCGGGCGTTGGCGAAAAGATCACGGACACGGGAAGGACCG 32314 Query 9785 ACACCAACAAACATCTCCACAAAGTTTG--CGGCGGAACATTGGATGAAGGGGACATTAG 9842 |||||||| |||||||| || || | | | || || | || ||| || || | Sbjct 32313 ACACCAACGAACATCTCGACGAACTCGGAACCGCTGACGCT--GAAGAAAGGCACGCCGG 32256 Query 9843 ATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGA 9902 ||||||| ||| |||| ||||| | |||||||| || || || ||| | ||||| Sbjct 32255 ATTCACCAGCAGTGGCCTTTGCGAGCAATGTCTTACCTGTGCCGGGAGGACCTGAGAGGA 32196 Query 9903 GGGCACCTCGTGGAATCTTGGCGCC 9927 |||||| || || |||||||| || Sbjct 32195 TGGCACCGCGAGGGATCTTGGCACC 32171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583255907900040