Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq531 223 1e-52 seq630 163 9e-35 seq454 141 3e-28 seq573 102 2e-16 >seq531 Length=104979 Score = 223 bits (246), Expect = 1e-52 Identities = 490/730 (67%), Gaps = 7/730 (1%) Strand=Plus/Minus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 ||||| | || || || || ||||| || || || ||||| | ||| | | |||| | Sbjct 68756 CCGCTGTCGGTATTGACTTGGGTACCACCTACTCCTGTGTGGGTGTCTTCAGAGATGACC 68697 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 | | ||||| ||||| || || || |||||| | || || || || | ||| || |||| Sbjct 68696 GCATTGAAATCATTGCCAACGACCAGGGTAACCGTACTACTCCCTCGTTCGTGGCTTTTA 68637 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376 |||| || |||||| | || |||||| | || || ||||| | || || || | | Sbjct 68636 CCGACACCGAGCGTCTCATCGGTGATGCCGCCAAGAATCAGGTCGCCATGAACCCTCACA 68577 Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACA 349434 | || ||||| ||||||||||| || || ||| | | || || | | | || Sbjct 68576 ACACCGTTTTCGATGCTAAGCGTCTGATCGGTCGTCGGTTCCAAGATGCTGAGGTTCAG- 68518 Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494 |||||| | || || | ||||| | ||||| | | ||| || | || || || || Sbjct 68517 -TCTGATATGAAGCACTGGCCTTTCAAGGTTGT-CGAGAAG--GGCGGCAAGCCCATCAT 68462 Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554 ||||||||| | || || || || || || || ||||| || || || ||||| Sbjct 68461 TGAGGTTGAGTTCAAGGGCGAGACCAAGCAGTTCACCCCTGAAGAGATCTCCTCCATGGT 68402 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614 | ||| ||| || | |||||||| || | |||| || || | | ||||| Sbjct 68401 CCTGACTAAGATGCGTGAGACCGCTGAAGCCTACCTCGGTGGCACTGTCAACAACGCTGT 68342 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 || || || || ||||| || || || | |||||| || || || |||||||| Sbjct 68341 CATCACCGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCCACCAAGGATGCTGGTCT 68282 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 ||| || || | || || || | || || || || || ||||| || || ||||| || Sbjct 68281 CATCGCCGGCCTGAACGTCCTCCGTATCATCAACGAGCCTACTGCCGCTGCCATTGCCTA 68222 Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 || ||||| || | | || || || | || || || ||| | |||||||| Sbjct 68221 CGGTCTTGACAAGAAGGCCGAGGGCGAGCGTAACGTCCTGATCTTCGATCTTGGTGGTGG 68162 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854 |||||| ||||| || || || || |||| ||||| || || || || || || || || Sbjct 68161 TACTTTCGATGTTTCCCTCCTGACCATTGAGGAGGGTATCTTCGAGGTCAAGGCTACCGC 68102 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914 ||| || || || || ||||| || || || ||||| ||||| ||| || |||||||| Sbjct 68101 TGGCGACACTCACCTGGGTGGTGAGGACTTCGATAACCGTCTTGTTAACCACTTTGTTAA 68042 Query 349915 AGAATTTAAG 349924 ||||| ||| Sbjct 68041 TGAATTCAAG 68032 >seq630 Length=388802 Score = 163 bits (180), Expect = 9e-35 Identities = 177/232 (76%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| | | || || ||||| || || || || ||||| ||||| ||||| Sbjct 62574 CATGCCACCACGCAGACGGAGGACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAATC 62515 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| || || || |||||||||||||| |||||||||||||| ||||| || |||||||| Sbjct 62514 AGACAAGGTACGGCCATCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCAGG 62455 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685 ||| || || || |||||||| || || ||| || ||||| || || | || || | | Sbjct 62454 AGGGATACCCTCCTTATCCTGGATCTT-GCTCTTGACATTGTCGATGGTGTCTGAAGACT 62396 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | ||||| | ||| | |||||||| || || || || || || || ||||| Sbjct 62395 CTACTTCTAATGTGATAGTCTTTCCCGTGAGAGTCTTAACGAAGATTTGCAT 62344 Score = 131 bits (144), Expect = 5e-25 Identities = 174/238 (73%), Gaps = 3/238 (1%) Strand=Plus/Minus Query 140501 ATTTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATT 140560 |||| ||| |||||||| | | || || || || || || ||| ||||||||||| Sbjct 62807 ATTTAGCAT-CCACCACGCAGACGCAGCACCAGGTGGAGCGTGCTCTCCTTTTGAATATT 62749 Query 140561 ATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTG 140620 ||||| || | || | ||||||||| | || || ||||| ||||| ||||| ||||| Sbjct 62748 GTAATCGGAGAGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTG 62689 Query 140621 ATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTT-ACATTATCAATCGAATCAG 140679 |||||||| || || || || || || || || ||| || || || ||||||| || | Sbjct 62688 GTCAGGAGGGATGCCCTCCTTGTCTTGGATCTT-GCTCTTCACGTTGTCAATCGTGTCGG 62630 Query 140680 ATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | | || || || || |||| ||||||||||| || || || || || |||||||| Sbjct 62629 AGGACTCCACCTCCAGGGTAATGGTCTTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 62572 Score = 125 bits (138), Expect = 2e-23 Identities = 171/236 (72%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| |||||||| | | ||||| || || |||||||| || || || || |||| Sbjct 62042 TTTGCATGCCACCACGAAGACGGAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTAT 61983 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| || | || || ||||| || || || || ||||| || || | || ||||| | Sbjct 61982 AATCGGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGT 61923 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 ||||||| || || || ||||||||||| || | || ||||| ||||| | || | || Sbjct 61922 CAGGAGGGATACCCTCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTC-GCTG 61864 Query 140683 G-TTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || | || | ||||| || || || || || || ||||||||||| Sbjct 61863 GACTCGACCTCCAAGGTGATGGTCTTGCCCGTGAGAGTCTTGACGAAAATCTGCAT 61808 Score = 122 bits (134), Expect = 3e-22 Identities = 163/224 (73%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || || || ||||| || || || ||||| |||| Sbjct 62350 TTTGCATACCACCACGAAGACGAAGGACGAGGTGGAGAGTCGATTCCTTCTGAATGTTAT 62291 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || || || || ||||| || | || || ||||| || || ||||| ||||| | Sbjct 62290 AGTCGGACAAGGTGCGGCCATCCTCCAACTGCTTGCCAGCGAAAATCAGACGCTGCTGGT 62231 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 ||||||| || || || || ||||| || || | || || |||||||| | ||| | || Sbjct 62230 CAGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTAACGTTATCAATGGTATC-GCTG 62172 Query 140683 G-TTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 | ||| || || || |||| ||||| || || || || || || Sbjct 62171 GATTCCACCTCGAGAGTAATGGTCTTGCCAGTGAGGGTCTTGAC 62128 >seq454 Length=51108 Score = 141 bits (156), Expect = 3e-28 Identities = 332/495 (67%), Gaps = 11/495 (2%) Strand=Plus/Plus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 ||||| || || |||||||| ||||| || ||| || ||| || || || || || Sbjct 18114 GCTGTCATCACCGTACCAGCTTATTTCAACGATAATCAACGTCAGGCGACGAAGGACGCA 18173 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 ||| |||||| || ||||||||||| | || || ||||| |||||||| || || || Sbjct 18174 GGCGCCATTGCCGGTTTAAATGTTCTCCGCATCATCAATGAGCCCACTGCCGCCGCTATC 18233 Query 349730 GCATATG-----GGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATT 349784 || |||| |||| ||||| || |||| ||| | || || | |||| Sbjct 18234 GCCTATGGACTCGGCTCCGGAAAAT--CCGAAAAAGAGCGTAATGTCCTGATATATGATC 18291 Query 349785 TAGGTGGTGGTACTTTTGATGTATCACTACT-AACACTTGAAGAGGGAATTTTTGAAGTT 349843 | ||||| |||||||| ||||| || || || |||| || ||| || |||| || Sbjct 18292 TTGGTGGAGGTACTTTCGATGTGTCTCTTCTCAACA-TTCAAGGAGGTGTTTTCACTGTC 18350 Query 349844 AAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCG 349903 || || || || |||||||| ||||| |||||| |||||||||| | ||| || Sbjct 18351 AAGGCCACAGCCGGTGATACTCATCTCGGTGGACAAGATTTTGACACCAACCTCCTTGAA 18410 Query 349904 CATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCA 349963 || || || ||||| || | || || ||| | || || | ||||| Sbjct 18411 CACTTCAAGAAGGAATTCCAGAAGAAGACTGGAAAGGATCTCTCAGGCGATGCCAGAGCT 18470 Query 349964 ATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAA 350023 | || || | ||||| || || || ||||| |||||| | | || |||| || Sbjct 18471 CTTCGCCGTTTGAGAACGGCCTGCGAGCGTGCCAAGCGTACACTGTCCAACGCTACACAG 18530 Query 350024 ACCTCTATTGAAATTGATTCTCTTGCT-GATGGCAAAGATTTCTTTTCATCTATTACACG 350082 || || |||| ||||| ||| ||| | ||||| | |||||| || ||||| || || Sbjct 18531 ACAACTGTTGAGATTGACTCT-TTGTTCGATGGAGAGGATTTCAACTCGTCTATCACTCG 18589 Query 350083 TGCTCGGTTTGAAGA 350097 ||| || ||||| || Sbjct 18590 TGCCCGCTTTGAGGA 18604 >seq573 Length=142936 Score = 102 bits (112), Expect = 2e-16 Identities = 206/306 (67%), Gaps = 0/306 (0%) Strand=Plus/Plus Query 378168 GTTTCTTACAGTCATATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCG 378227 |||||| ||||| ||||| ||||||| | ||||| || || |||| || || Sbjct 102205 GTTTCTGACAGTACCGTCATACTTAACCATGACCTCTTCCAAGGCCTTAACCAGCTTCCG 102264 Query 378228 AGAAATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACC 378287 |||||||||||||| ||| || || |||||||| || | ||| | ||||| | Sbjct 102265 CTGAATATAACCAGTTTCGGCAGTCTTGACGGCAGTATCGATCAGACCTTCTCGACCGGC 102324 Query 378288 CATTGCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAA 378347 ||| ||||| ||||| |||||||| || || || |||| | | | || | || | ||| Sbjct 102325 CATGGCATGAAAGAAGAATTCAGTTGGGGTTAGGCCACGCAGATAAGAGTTTTCCACAAA 102384 Query 378348 TCCTCTTGCGCCTGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAA 378407 ||| | | | || || | ||||| || || |||| || | ||||||| | || Sbjct 102385 TCCGCGAGATTCCGGAGAGTAATCATCCTTGGTGAAATGGGGAAGAGTACGATATTTGAA 102444 Query 378408 CCCATATGGAATTCGTTTTCCATCAACATTCTGTTGACCAAGTGCAGAAACCATTTGAGC 378467 || | ||||| || || || || || ||| ||||| | ||| | ||| |||| Sbjct 102445 TCCGAAAGGAATACGCTTGCCTTCGACGGACTGCTGACCCACAACAGCAGTCATCTGAGA 102504 Query 378468 AATATT 378473 ||||| Sbjct 102505 GATATT 102510 Score = 87.8 bits (96), Expect = 5e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 377494 ACACCAGCAAAGTGGAAAGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGC 377553 ||||||||||||||||||||||| | || | || |||| |||||||||||| ||||| Sbjct 101513 ACACCAGCAAAGTGGAAAGTATTCAAGGTCATCTGTGTAGCGGGCTCACCAATAGACTGA 101572 Query 377554 GCTGCAATAACGCCAACCATTTCTCCAGGATTGACAATAGCCT 377596 || || | || ||||||||||| || || || || ||||| Sbjct 101573 GCGGCTAGCACACCAACCATTTCACCTGGGTTAGCAGCAGCCT 101615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515241373073813