Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20var._20RP-
2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq531 223 1e-52
seq630 163 9e-35
seq454 141 3e-28
seq573 102 2e-16
>seq531
Length=104979
Score = 223 bits (246), Expect = 1e-52
Identities = 490/730 (67%), Gaps = 7/730 (1%)
Strand=Plus/Minus
Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256
||||| | || || || || ||||| || || || ||||| | ||| | | |||| |
Sbjct 68756 CCGCTGTCGGTATTGACTTGGGTACCACCTACTCCTGTGTGGGTGTCTTCAGAGATGACC 68697
Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316
| | ||||| ||||| || || || |||||| | || || || || | ||| || ||||
Sbjct 68696 GCATTGAAATCATTGCCAACGACCAGGGTAACCGTACTACTCCCTCGTTCGTGGCTTTTA 68637
Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376
|||| || |||||| | || |||||| | || || ||||| | || || || | |
Sbjct 68636 CCGACACCGAGCGTCTCATCGGTGATGCCGCCAAGAATCAGGTCGCCATGAACCCTCACA 68577
Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACA 349434
| || ||||| ||||||||||| || || ||| | | || || | | | ||
Sbjct 68576 ACACCGTTTTCGATGCTAAGCGTCTGATCGGTCGTCGGTTCCAAGATGCTGAGGTTCAG- 68518
Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494
|||||| | || || | ||||| | ||||| | | ||| || | || || || ||
Sbjct 68517 -TCTGATATGAAGCACTGGCCTTTCAAGGTTGT-CGAGAAG--GGCGGCAAGCCCATCAT 68462
Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554
||||||||| | || || || || || || || ||||| || || || |||||
Sbjct 68461 TGAGGTTGAGTTCAAGGGCGAGACCAAGCAGTTCACCCCTGAAGAGATCTCCTCCATGGT 68402
Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614
| ||| ||| || | |||||||| || | |||| || || | | |||||
Sbjct 68401 CCTGACTAAGATGCGTGAGACCGCTGAAGCCTACCTCGGTGGCACTGTCAACAACGCTGT 68342
Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674
|| || || || ||||| || || || | |||||| || || || ||||||||
Sbjct 68341 CATCACCGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCCACCAAGGATGCTGGTCT 68282
Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734
||| || || | || || || | || || || || || ||||| || || ||||| ||
Sbjct 68281 CATCGCCGGCCTGAACGTCCTCCGTATCATCAACGAGCCTACTGCCGCTGCCATTGCCTA 68222
Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794
|| ||||| || | | || || || | || || || ||| | ||||||||
Sbjct 68221 CGGTCTTGACAAGAAGGCCGAGGGCGAGCGTAACGTCCTGATCTTCGATCTTGGTGGTGG 68162
Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854
|||||| ||||| || || || || |||| ||||| || || || || || || || ||
Sbjct 68161 TACTTTCGATGTTTCCCTCCTGACCATTGAGGAGGGTATCTTCGAGGTCAAGGCTACCGC 68102
Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914
||| || || || || ||||| || || || ||||| ||||| ||| || ||||||||
Sbjct 68101 TGGCGACACTCACCTGGGTGGTGAGGACTTCGATAACCGTCTTGTTAACCACTTTGTTAA 68042
Query 349915 AGAATTTAAG 349924
||||| |||
Sbjct 68041 TGAATTCAAG 68032
>seq630
Length=388802
Score = 163 bits (180), Expect = 9e-35
Identities = 177/232 (76%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||| |||||||| | | || || ||||| || || || || ||||| ||||| |||||
Sbjct 62574 CATGCCACCACGCAGACGGAGGACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAATC 62515
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
||| || || || |||||||||||||| |||||||||||||| ||||| || ||||||||
Sbjct 62514 AGACAAGGTACGGCCATCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCAGG 62455
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685
||| || || || |||||||| || || ||| || ||||| || || | || || | |
Sbjct 62454 AGGGATACCCTCCTTATCCTGGATCTT-GCTCTTGACATTGTCGATGGTGTCTGAAGACT 62396
Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
| ||||| | ||| | |||||||| || || || || || || || |||||
Sbjct 62395 CTACTTCTAATGTGATAGTCTTTCCCGTGAGAGTCTTAACGAAGATTTGCAT 62344
Score = 131 bits (144), Expect = 5e-25
Identities = 174/238 (73%), Gaps = 3/238 (1%)
Strand=Plus/Minus
Query 140501 ATTTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATT 140560
|||| ||| |||||||| | | || || || || || || ||| |||||||||||
Sbjct 62807 ATTTAGCAT-CCACCACGCAGACGCAGCACCAGGTGGAGCGTGCTCTCCTTTTGAATATT 62749
Query 140561 ATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTG 140620
||||| || | || | ||||||||| | || || ||||| ||||| ||||| |||||
Sbjct 62748 GTAATCGGAGAGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTG 62689
Query 140621 ATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTT-ACATTATCAATCGAATCAG 140679
|||||||| || || || || || || || || ||| || || || ||||||| || |
Sbjct 62688 GTCAGGAGGGATGCCCTCCTTGTCTTGGATCTT-GCTCTTCACGTTGTCAATCGTGTCGG 62630
Query 140680 ATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
| | || || || || |||| ||||||||||| || || || || || ||||||||
Sbjct 62629 AGGACTCCACCTCCAGGGTAATGGTCTTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 62572
Score = 125 bits (138), Expect = 2e-23
Identities = 171/236 (72%), Gaps = 2/236 (1%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| ||| |||||||| | | ||||| || || |||||||| || || || || ||||
Sbjct 62042 TTTGCATGCCACCACGAAGACGGAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTAT 61983
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
|||| || | || || ||||| || || || || ||||| || || | || ||||| |
Sbjct 61982 AATCGGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGT 61923
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
||||||| || || || ||||||||||| || | || ||||| ||||| | || | ||
Sbjct 61922 CAGGAGGGATACCCTCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTC-GCTG 61864
Query 140683 G-TTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
| || || || | || | ||||| || || || || || || |||||||||||
Sbjct 61863 GACTCGACCTCCAAGGTGATGGTCTTGCCCGTGAGAGTCTTGACGAAAATCTGCAT 61808
Score = 122 bits (134), Expect = 3e-22
Identities = 163/224 (73%), Gaps = 2/224 (1%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | || || || || ||||| || || || ||||| ||||
Sbjct 62350 TTTGCATACCACCACGAAGACGAAGGACGAGGTGGAGAGTCGATTCCTTCTGAATGTTAT 62291
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || || || || ||||| || | || || ||||| || || ||||| ||||| |
Sbjct 62290 AGTCGGACAAGGTGCGGCCATCCTCCAACTGCTTGCCAGCGAAAATCAGACGCTGCTGGT 62231
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
||||||| || || || || ||||| || || | || || |||||||| | ||| | ||
Sbjct 62230 CAGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTAACGTTATCAATGGTATC-GCTG 62172
Query 140683 G-TTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725
| ||| || || || |||| ||||| || || || || || ||
Sbjct 62171 GATTCCACCTCGAGAGTAATGGTCTTGCCAGTGAGGGTCTTGAC 62128
>seq454
Length=51108
Score = 141 bits (156), Expect = 3e-28
Identities = 332/495 (67%), Gaps = 11/495 (2%)
Strand=Plus/Plus
Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669
||||| || || |||||||| ||||| || ||| || ||| || || || || ||
Sbjct 18114 GCTGTCATCACCGTACCAGCTTATTTCAACGATAATCAACGTCAGGCGACGAAGGACGCA 18173
Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729
||| |||||| || ||||||||||| | || || ||||| |||||||| || || ||
Sbjct 18174 GGCGCCATTGCCGGTTTAAATGTTCTCCGCATCATCAATGAGCCCACTGCCGCCGCTATC 18233
Query 349730 GCATATG-----GGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATT 349784
|| |||| |||| ||||| || |||| ||| | || || | ||||
Sbjct 18234 GCCTATGGACTCGGCTCCGGAAAAT--CCGAAAAAGAGCGTAATGTCCTGATATATGATC 18291
Query 349785 TAGGTGGTGGTACTTTTGATGTATCACTACT-AACACTTGAAGAGGGAATTTTTGAAGTT 349843
| ||||| |||||||| ||||| || || || |||| || ||| || |||| ||
Sbjct 18292 TTGGTGGAGGTACTTTCGATGTGTCTCTTCTCAACA-TTCAAGGAGGTGTTTTCACTGTC 18350
Query 349844 AAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCG 349903
|| || || || |||||||| ||||| |||||| |||||||||| | ||| ||
Sbjct 18351 AAGGCCACAGCCGGTGATACTCATCTCGGTGGACAAGATTTTGACACCAACCTCCTTGAA 18410
Query 349904 CATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCA 349963
|| || || ||||| || | || || ||| | || || | |||||
Sbjct 18411 CACTTCAAGAAGGAATTCCAGAAGAAGACTGGAAAGGATCTCTCAGGCGATGCCAGAGCT 18470
Query 349964 ATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAA 350023
| || || | ||||| || || || ||||| |||||| | | || |||| ||
Sbjct 18471 CTTCGCCGTTTGAGAACGGCCTGCGAGCGTGCCAAGCGTACACTGTCCAACGCTACACAG 18530
Query 350024 ACCTCTATTGAAATTGATTCTCTTGCT-GATGGCAAAGATTTCTTTTCATCTATTACACG 350082
|| || |||| ||||| ||| ||| | ||||| | |||||| || ||||| || ||
Sbjct 18531 ACAACTGTTGAGATTGACTCT-TTGTTCGATGGAGAGGATTTCAACTCGTCTATCACTCG 18589
Query 350083 TGCTCGGTTTGAAGA 350097
||| || ||||| ||
Sbjct 18590 TGCCCGCTTTGAGGA 18604
>seq573
Length=142936
Score = 102 bits (112), Expect = 2e-16
Identities = 206/306 (67%), Gaps = 0/306 (0%)
Strand=Plus/Plus
Query 378168 GTTTCTTACAGTCATATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCG 378227
|||||| ||||| ||||| ||||||| | ||||| || || |||| || ||
Sbjct 102205 GTTTCTGACAGTACCGTCATACTTAACCATGACCTCTTCCAAGGCCTTAACCAGCTTCCG 102264
Query 378228 AGAAATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACC 378287
|||||||||||||| ||| || || |||||||| || | ||| | ||||| |
Sbjct 102265 CTGAATATAACCAGTTTCGGCAGTCTTGACGGCAGTATCGATCAGACCTTCTCGACCGGC 102324
Query 378288 CATTGCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAA 378347
||| ||||| ||||| |||||||| || || || |||| | | | || | || | |||
Sbjct 102325 CATGGCATGAAAGAAGAATTCAGTTGGGGTTAGGCCACGCAGATAAGAGTTTTCCACAAA 102384
Query 378348 TCCTCTTGCGCCTGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAA 378407
||| | | | || || | ||||| || || |||| || | ||||||| | ||
Sbjct 102385 TCCGCGAGATTCCGGAGAGTAATCATCCTTGGTGAAATGGGGAAGAGTACGATATTTGAA 102444
Query 378408 CCCATATGGAATTCGTTTTCCATCAACATTCTGTTGACCAAGTGCAGAAACCATTTGAGC 378467
|| | ||||| || || || || || ||| ||||| | ||| | ||| ||||
Sbjct 102445 TCCGAAAGGAATACGCTTGCCTTCGACGGACTGCTGACCCACAACAGCAGTCATCTGAGA 102504
Query 378468 AATATT 378473
|||||
Sbjct 102505 GATATT 102510
Score = 87.8 bits (96), Expect = 5e-12
Identities = 81/103 (79%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 377494 ACACCAGCAAAGTGGAAAGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGC 377553
||||||||||||||||||||||| | || | || |||| |||||||||||| |||||
Sbjct 101513 ACACCAGCAAAGTGGAAAGTATTCAAGGTCATCTGTGTAGCGGGCTCACCAATAGACTGA 101572
Query 377554 GCTGCAATAACGCCAACCATTTCTCCAGGATTGACAATAGCCT 377596
|| || | || ||||||||||| || || || || |||||
Sbjct 101573 GCGGCTAGCACACCAACCATTTCACCTGGGTTAGCAGCAGCCT 101615
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515241373073813
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