Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq586 158 1e-33 seq405 111 2e-19 >seq586 Length=168373 Score = 158 bits (174), Expect = 1e-33 Identities = 382/576 (66%), Gaps = 2/576 (0%) Strand=Plus/Minus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 || ||| || | || ||||| || ||||| ||||| |||||| || | | | | Sbjct 81819 CCGCAGCACTTGTTGATGCGTGTTGCGGTTGGCATTCATGGCAACAATATTGAAAAGGCC 81760 Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222 ||||| ||| |||| ||| ||||| | |||||| || || | || || || ||| Sbjct 81759 ATTGAGACCTACCACCTCATGTCTCAGAAATACTTCACTCATGCTTCTCCTACTCTGTTC 81700 Query 19223 AACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGAC 19282 || || ||||| | | || ||| | || || ||||| || | ||||||||| || Sbjct 81699 AATGCTGGTACTCCCCAACCCCAGCTTGCGTCTTGCTTCCTCGTCGATATGAAGGAGGAT 81640 Query 19283 AGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGG 19342 ||||||||||| |||||||| || || ||| || || ||||| ||| | || Sbjct 81639 AGCATTGAGGGTATCTACGACACCCTTAAGACTTGTGCCATGATCTCGAAGACAGCTGGC 81580 Query 19343 GGTATCGGGATCCACTGCTCGAAT-ATCCGGTCGAGTGGTACACGAATCAATGGGACGAA 19401 |||||||| | || | || ||||| | | || | || ||| || || Sbjct 81579 GGTATCGGCCTTAAC-GTTCACCGCATCCGTGCCACAGGCTCCTACATTGGTGGCACTAA 81521 Query 19402 CGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGT 19461 || | ||||||| || || ||||| ||||| ||||||||||| || ||||| || Sbjct 81520 TGGGTCCTCTAACGGTATTGTTCCCATGCTTCGCGTGTTCAACAACACTGCTAGGTATGT 81461 Query 19462 CAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGC 19521 | ||||||| || ||| ||| ||| | || || || ||||||||||| ||||| || Sbjct 81460 CGACCAGGGAGGTAACAAGCGCCCTGGCGCTTTTGCTATTTACCTCGAGCCTTGGCATGC 81401 Query 19522 GGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCG 19581 || || | || ||||| || || ||| |||||| ||| | ||||| | | || Sbjct 81400 CGATATCTTCGAGTTCCTGGATCTTCGCAAGAACCACGGTAAGGAGGAAGTCAGAGCCCG 81341 Query 19582 CGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGA 19641 || || ||| || |||||| || || || |||||| || |||||| ||| Sbjct 81340 TGATCTGTTCTACGCGCTGTGGACCCCTGATCTGTTCATGAAGCGAGTTGAGTCCAACGG 81281 Query 19642 AGAATGGCACCTGATGTGCCCGCACGAATGCCCTGG 19677 || ||| ||| | ||||| | ||| |||||| Sbjct 81280 TGACTGGACTCTGTTCTGCCCCAATGAAGCCCCTGG 81245 Score = 136 bits (150), Expect = 4e-27 Identities = 390/597 (65%), Gaps = 2/597 (0%) Strand=Plus/Plus Query 79306 TCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCG 79365 || ||||| ||||| | || || ||| || | ||||| | ||| |||||| || Sbjct 81224 TCACCATAAACATCTGCCAAACCAGGGGCTTCATTGGGGCAGAACAGAGTCCAGTCACCG 81283 Query 79366 TCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGG 79425 | |||||| || |||||| || || ||| ||||||| || ||| || || ||| Sbjct 81284 TTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGCGCGTAGAACAGATCACGG 81343 Query 79426 CAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCG 79485 | | ||||| | || |||||| || || || || || || | ||| ||||| Sbjct 81344 GCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAGGAACTCGAAGATATCGGCA 81403 Query 79486 TGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACG 79545 ||||| ||||| || || || || || | || ||||||| || ||||||| ||| Sbjct 81404 TGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTGTTACCTCCCTGGTCGACA 81463 Query 79546 TACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTC 79605 |||| || ||||||||||| || || |||||||| || || |||| | | || || Sbjct 81464 TACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAGGACCCATTA 81523 Query 79606 GTCCCGTTGATTCGTGTACCGCTCGCCCGAATG-TTCGAGCAGTGGATTCCGATGCCCCC 79664 || || || | || | || || ||| || | || | ||||| || || Sbjct 81524 GTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAAC-GTTAAGGCCGATACCGCC 81582 Query 79665 GGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTC 79724 | ||| ||||| || || ||| || || |||||||| ||||| || || Sbjct 81583 AGCTGTCTTCGAGATCATGGCACAAGTCTTAAGGGTGTCGTAGATACCCTCAATGCTATC 81642 Query 79725 GTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAA 79784 ||||||||| |||| |||||||| || | ||| || | | ||||| || ||||| Sbjct 81643 CTCCTTCATATCGACGAGGAAGCAAGACGCAAGCTGGGGTTGGGGAGTACCAGCATTGAA 81702 Query 79785 GAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGAC 79844 || || || | || || |||||| | || || ||| || | ||| ||||| || | Sbjct 81703 CAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTAGGTCTCAATGGC 81762 Query 79845 GCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTGGGG 79901 | | || ||| || ||||| ||||| || ||||| || | || ||| || Sbjct 81763 CTTTTCAATATTGTTGCCATGAATGCCAACCGCAACACGCATCAACAAGTGCTGCGG 81819 >seq405 Length=35189 Score = 111 bits (122), Expect = 2e-19 Identities = 288/425 (68%), Gaps = 18/425 (4%) Strand=Plus/Plus Query 60003 GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGC 60062 ||||| |||||||| |||||||| || || | | || |||||||| || ||||||||| Sbjct 2498 GTGGAGGGAATCTTTTTCTCTGGATCTTTTGCTTCCATCTTCTGGCTGAAGAAGCGTGGC 2557 Query 60063 CTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAG 60122 | ||||| || || | ||||||||||||||| || || || |||||||| || || Sbjct 2558 TTGATGCCTGGTCTCACTTTCTCCAACGAGCTCATCTCTCGTGACGAGGGACTACACACA 2617 Query 60123 GAGTTTGCAGTGAC-GCTCTATTCACACCTATTGGAAAAATGCCCTTCC---AAGGATAT 60178 || ||||| || | |||| ||| ||| ||| | | |||| | |||| ||| Sbjct 2618 GACTTTGC-TTGCCTTCTCTTTTCTCAC---TTGAACCATCGCCCCGACAAGAAGGTTAT 2673 Query 60179 TCACAAGATTGTTCAGTG-GGCT-TGTGAAGTGGAGAGCGAGTTCATCACAGAAGCGCTT 60236 | | | ||| || || |||| || | || | || |||||| | ||||| || ||| Sbjct 2674 TGAGGATATT-ATCGTTGAGGCTGTGGCCATTGAACAG-GAGTTCTTGACAGACGCTCTT 2731 Query 60237 CC--ATGCAAACTCATAGGTATGGACGCTGGAGAAATGACGCAGTACATTCAGTTTGTCG 60294 || ||| ||| | || ||| || || |||| ||||| ||| |||| || | Sbjct 2732 CCTGTTGC--TCTCCTGGGCATGAACTCTAAGCTAATGTGCCAGTATATTGAGTTCGTTG 2789 Query 60295 CGGACCGCCTCATGGCCCAGTTTGGAGA-AGGACCAATTTACGGCGTGAATAACCCTTTC 60353 | || || || ||| ||||| | | || | || | | ||||| ||| Sbjct 2790 CTGATCGGCTGTTGGTTGCTCTTGGAAACAAGAAGTACTT-CAACTCTCCCAACCCCTTC 2848 Query 60354 GACTGGATGGAGACCATCTCGTTGGAAGGGAAGACCAACTTCTTTGAGAAGCGGGTCGGG 60413 |||| ||||| | |||||| | | ||| ||||| ||||||||||||||||| || || Sbjct 2849 GACTTCATGGAAAGTATCTCGCTTGCAGGAAAGACGAACTTCTTTGAGAAGCGTGTTGGT 2908 Query 60414 GATTA 60418 || || Sbjct 2909 GACTA 2913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548520199248240