Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20var._20RP-
2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq586 158 1e-33
seq405 111 2e-19
>seq586
Length=168373
Score = 158 bits (174), Expect = 1e-33
Identities = 382/576 (66%), Gaps = 2/576 (0%)
Strand=Plus/Minus
Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162
|| ||| || | || ||||| || ||||| ||||| |||||| || | | | |
Sbjct 81819 CCGCAGCACTTGTTGATGCGTGTTGCGGTTGGCATTCATGGCAACAATATTGAAAAGGCC 81760
Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222
||||| ||| |||| ||| ||||| | |||||| || || | || || || |||
Sbjct 81759 ATTGAGACCTACCACCTCATGTCTCAGAAATACTTCACTCATGCTTCTCCTACTCTGTTC 81700
Query 19223 AACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGAC 19282
|| || ||||| | | || ||| | || || ||||| || | ||||||||| ||
Sbjct 81699 AATGCTGGTACTCCCCAACCCCAGCTTGCGTCTTGCTTCCTCGTCGATATGAAGGAGGAT 81640
Query 19283 AGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGG 19342
||||||||||| |||||||| || || ||| || || ||||| ||| | ||
Sbjct 81639 AGCATTGAGGGTATCTACGACACCCTTAAGACTTGTGCCATGATCTCGAAGACAGCTGGC 81580
Query 19343 GGTATCGGGATCCACTGCTCGAAT-ATCCGGTCGAGTGGTACACGAATCAATGGGACGAA 19401
|||||||| | || | || ||||| | | || | || ||| || ||
Sbjct 81579 GGTATCGGCCTTAAC-GTTCACCGCATCCGTGCCACAGGCTCCTACATTGGTGGCACTAA 81521
Query 19402 CGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGT 19461
|| | ||||||| || || ||||| ||||| ||||||||||| || ||||| ||
Sbjct 81520 TGGGTCCTCTAACGGTATTGTTCCCATGCTTCGCGTGTTCAACAACACTGCTAGGTATGT 81461
Query 19462 CAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGC 19521
| ||||||| || ||| ||| ||| | || || || ||||||||||| ||||| ||
Sbjct 81460 CGACCAGGGAGGTAACAAGCGCCCTGGCGCTTTTGCTATTTACCTCGAGCCTTGGCATGC 81401
Query 19522 GGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCG 19581
|| || | || ||||| || || ||| |||||| ||| | ||||| | | ||
Sbjct 81400 CGATATCTTCGAGTTCCTGGATCTTCGCAAGAACCACGGTAAGGAGGAAGTCAGAGCCCG 81341
Query 19582 CGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGA 19641
|| || ||| || |||||| || || || |||||| || |||||| |||
Sbjct 81340 TGATCTGTTCTACGCGCTGTGGACCCCTGATCTGTTCATGAAGCGAGTTGAGTCCAACGG 81281
Query 19642 AGAATGGCACCTGATGTGCCCGCACGAATGCCCTGG 19677
|| ||| ||| | ||||| | ||| ||||||
Sbjct 81280 TGACTGGACTCTGTTCTGCCCCAATGAAGCCCCTGG 81245
Score = 136 bits (150), Expect = 4e-27
Identities = 390/597 (65%), Gaps = 2/597 (0%)
Strand=Plus/Plus
Query 79306 TCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCG 79365
|| ||||| ||||| | || || ||| || | ||||| | ||| |||||| ||
Sbjct 81224 TCACCATAAACATCTGCCAAACCAGGGGCTTCATTGGGGCAGAACAGAGTCCAGTCACCG 81283
Query 79366 TCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGG 79425
| |||||| || |||||| || || ||| ||||||| || ||| || || |||
Sbjct 81284 TTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGCGCGTAGAACAGATCACGG 81343
Query 79426 CAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCG 79485
| | ||||| | || |||||| || || || || || || | ||| |||||
Sbjct 81344 GCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAGGAACTCGAAGATATCGGCA 81403
Query 79486 TGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACG 79545
||||| ||||| || || || || || | || ||||||| || ||||||| |||
Sbjct 81404 TGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTGTTACCTCCCTGGTCGACA 81463
Query 79546 TACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTC 79605
|||| || ||||||||||| || || |||||||| || || |||| | | || ||
Sbjct 81464 TACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAGGACCCATTA 81523
Query 79606 GTCCCGTTGATTCGTGTACCGCTCGCCCGAATG-TTCGAGCAGTGGATTCCGATGCCCCC 79664
|| || || | || | || || ||| || | || | ||||| || ||
Sbjct 81524 GTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAAC-GTTAAGGCCGATACCGCC 81582
Query 79665 GGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTC 79724
| ||| ||||| || || ||| || || |||||||| ||||| || ||
Sbjct 81583 AGCTGTCTTCGAGATCATGGCACAAGTCTTAAGGGTGTCGTAGATACCCTCAATGCTATC 81642
Query 79725 GTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAA 79784
||||||||| |||| |||||||| || | ||| || | | ||||| || |||||
Sbjct 81643 CTCCTTCATATCGACGAGGAAGCAAGACGCAAGCTGGGGTTGGGGAGTACCAGCATTGAA 81702
Query 79785 GAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGAC 79844
|| || || | || || |||||| | || || ||| || | ||| ||||| || |
Sbjct 81703 CAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTAGGTCTCAATGGC 81762
Query 79845 GCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTGGGG 79901
| | || ||| || ||||| ||||| || ||||| || | || ||| ||
Sbjct 81763 CTTTTCAATATTGTTGCCATGAATGCCAACCGCAACACGCATCAACAAGTGCTGCGG 81819
>seq405
Length=35189
Score = 111 bits (122), Expect = 2e-19
Identities = 288/425 (68%), Gaps = 18/425 (4%)
Strand=Plus/Plus
Query 60003 GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGC 60062
||||| |||||||| |||||||| || || | | || |||||||| || |||||||||
Sbjct 2498 GTGGAGGGAATCTTTTTCTCTGGATCTTTTGCTTCCATCTTCTGGCTGAAGAAGCGTGGC 2557
Query 60063 CTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAG 60122
| ||||| || || | ||||||||||||||| || || || |||||||| || ||
Sbjct 2558 TTGATGCCTGGTCTCACTTTCTCCAACGAGCTCATCTCTCGTGACGAGGGACTACACACA 2617
Query 60123 GAGTTTGCAGTGAC-GCTCTATTCACACCTATTGGAAAAATGCCCTTCC---AAGGATAT 60178
|| ||||| || | |||| ||| ||| ||| | | |||| | |||| |||
Sbjct 2618 GACTTTGC-TTGCCTTCTCTTTTCTCAC---TTGAACCATCGCCCCGACAAGAAGGTTAT 2673
Query 60179 TCACAAGATTGTTCAGTG-GGCT-TGTGAAGTGGAGAGCGAGTTCATCACAGAAGCGCTT 60236
| | | ||| || || |||| || | || | || |||||| | ||||| || |||
Sbjct 2674 TGAGGATATT-ATCGTTGAGGCTGTGGCCATTGAACAG-GAGTTCTTGACAGACGCTCTT 2731
Query 60237 CC--ATGCAAACTCATAGGTATGGACGCTGGAGAAATGACGCAGTACATTCAGTTTGTCG 60294
|| ||| ||| | || ||| || || |||| ||||| ||| |||| || |
Sbjct 2732 CCTGTTGC--TCTCCTGGGCATGAACTCTAAGCTAATGTGCCAGTATATTGAGTTCGTTG 2789
Query 60295 CGGACCGCCTCATGGCCCAGTTTGGAGA-AGGACCAATTTACGGCGTGAATAACCCTTTC 60353
| || || || ||| ||||| | | || | || | | ||||| |||
Sbjct 2790 CTGATCGGCTGTTGGTTGCTCTTGGAAACAAGAAGTACTT-CAACTCTCCCAACCCCTTC 2848
Query 60354 GACTGGATGGAGACCATCTCGTTGGAAGGGAAGACCAACTTCTTTGAGAAGCGGGTCGGG 60413
|||| ||||| | |||||| | | ||| ||||| ||||||||||||||||| || ||
Sbjct 2849 GACTTCATGGAAAGTATCTCGCTTGCAGGAAAGACGAACTTCTTTGAGAAGCGTGTTGGT 2908
Query 60414 GATTA 60418
|| ||
Sbjct 2909 GACTA 2913
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548520199248240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |