Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq630 176 5e-39 seq615 132 5e-26 seq606 116 4e-21 >seq630 Length=388802 Score = 176 bits (194), Expect = 5e-39 Identities = 168/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 |||||||| || || |||||||| |||||||| ||||| || || | |||| ||||| Sbjct 62128 GTCAAGACCCTCACTGGCAAGACCATTACTCTCGAGGTGGAATCCAGCGATACCATTGAT 62187 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 || | ||| | || || |||||||||||||| || ||||| |||||||||||||| ||| Sbjct 62188 AACGTTAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTGATT 62247 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 || ||||| ||||| | ||||||| || ||| | | |||||||| | || |||||| Sbjct 62248 TTCGCTGGCAAGCAGTTGGAGGATGGCCGCACCTTGTCCGACTATAACATTCAGAAGGAA 62307 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || ||||| || || ||| | |||||||| ||||| Sbjct 62308 TCGACTCTCCACCTCGTCCTTCGTCTTCGTGGTGG 62342 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || || |||||||| || || | ||||| ||||| | Sbjct 61808 ATGCAGATTTTCGTCAAGACTCTCACGGGCAAGACCATCACCTTGGAGGTCGAGTCCAGC 61867 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||| | || |||||||| |||||||| || ||||| |||||| Sbjct 61868 GACACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCAG 61927 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | ||||| ||||| ||||| |||||||||| || || || | || ||||| Sbjct 61928 CAGCGCTTGATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTTTCCGATTATAAC 61987 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||| ||||| || || || | |||||||| ||||| Sbjct 61988 ATCCAGAAGGAATCTACTCTGCACCTGGTTCTCCGTCTTCGTGGTGG 62034 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| || || || |||||||| || | || || ||||| Sbjct 62344 ATGCAAATCTTCGTTAAGACTCTCACGGGAAAGACTATCACATTAGAAGTAGAGTCTTCA 62403 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||| || || ||||| |||||||| || ||||| || || Sbjct 62404 GACACCATCGACAATGTCAAGAGCAAGATCCAGGATAAGGAGGGTATCCCTCCTGATCAA 62463 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || |||||||| |||||||| || |||| |||||| | | || || ||| Sbjct 62464 CAGCGTCTCATCTTTGCTGGAAAGCAACTTGAAGATGGCCGTACCTTGTCTGATTACAAT 62523 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||||||||||| || ||||| ||| | ||||| || ||||| Sbjct 62524 ATCCAAAAGGAATCCACACTGCATCTGGTCCTCCGTCTGCGTGGTGG 62570 Score = 150 bits (166), Expect = 2e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || ||||| ||||| ||||| || ||||| ||||| Sbjct 62572 ATGCAGATCTTCGTCAAGACTCTCACCGGAAAGACCATTACCCTGGAGGTGGAGTCCTCC 62631 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || ||||| || || || ||||||||||| || ||||| |||||| Sbjct 62632 GACACGATTGACAACGTGAAGAGCAAGATCCAAGACAAGGAGGGCATCCCTCCTGACCAG 62691 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || ||||||||||| | || |||| | ||||| | || || ||| Sbjct 62692 CAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGGAGGACCCTCTCCGATTACAAT 62751 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | |||||||| ||| || || || || ||||||| || |||||| Sbjct 62752 ATTCAAAAGGAGAGCACGCTCCACCTGGTGCTGCGTCTGCGTGGTGGA 62799 >seq615 Length=220600 Score = 132 bits (146), Expect = 5e-26 Identities = 140/182 (77%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| || || || ||||||||||| || || |||||||| | || | ||| Sbjct 21041 TTCGTCAAGACCCTGACGGGTAAGACTATTACCCTCGACGTTGAGTCGAGCGACACCATC 21100 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | || | ||||| || || |||||||||||||| || || || ||||||||||| || Sbjct 21101 GACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCTG 21160 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAA 27593 || || ||||||||||| || ||||||| || ||||| ||| ||||| || | || || Sbjct 21161 ATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGC-GACTACAACATTCAGAA 21219 Query 27594 GG 27595 || Sbjct 21220 GG 21221 >seq606 Length=198141 Score = 116 bits (128), Expect = 4e-21 Identities = 106/134 (79%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 |||||||||||||| || || |||||||||||||| || || ||||| ||||| |||||| Sbjct 90918 GACAAGGAGGGAATCCCCCCCGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAG 90859 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 || | ||||||||| | ||||| || |||| ||||| || || || || || || | Sbjct 90858 GACGGTCGTACCCTCTCTGACTACAACATCCAGAAGGAGTCGACCCTGCACCTCGTGCTC 90799 Query 27619 CGTCTTCGCGGTGG 27632 ||||| || ||||| Sbjct 90798 CGTCTGCGTGGTGG 90785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570305616521520