Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq630 141 8e-29 >seq630 Length=388802 Score = 141 bits (156), Expect = 8e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || ||||| ||||| ||| | ||||| || || ||||| | || Sbjct 62571 CATGCAGATCTTCGTCAAGACTCTCACCGGAAAGACCATTACCCTGGAGGTGGAGTCCTC 62630 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| ||||||| | || || || || |||||||| || ||||| || || || || Sbjct 62631 CGACACGATTGACAACGTGAAGAGCAAGATCCAAGACAAGGAGGGCATCCCTCCTGACCA 62690 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | ||| || || || |||||||| | |||| | ||||||||||| Sbjct 62691 GCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGGAGGACCCTCTCCGATTACAA 62750 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 |||||||||||| || | || |||| ||||| |||| ||||| Sbjct 62751 TATTCAAAAGGAGAGCACGCTCCACCTGGTGCTGCGTCTGCGTGGTGG 62798 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||||| || || ||| |||| || | ||||| || | || Sbjct 62344 ATGCAAATCTTCGTTAAGACTCTCACGGGAAAGACTATCACATTAGAAGTAGAGTCTTCA 62403 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || || || || || || || || |||||| Sbjct 62404 GACACCATCGACAATGTCAAGAGCAAGATCCAGGATAAGGAGGGTATCCCTCCTGATCAA 62463 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || || || ||| | ||||| | ||| | || |||||||| Sbjct 62464 CAGCGTCTCATCTTTGCTGGAAAGCAACTTGAAGATGGCCGTACCTTGTCTGATTACAAT 62523 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||| || || | ||| |||| | ||| |||| |||||||| Sbjct 62524 ATCCAAAAGGAATCCACACTGCATCTGGTCCTCCGTCTGCGTGGTGGCAT 62573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434914752121920