Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq630 95.1 1e-14 >seq630 Length=388802 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 ||||| || ||||||||||| ||||| ||||| ||||||| || || | | || || Sbjct 62781 CACCAGGTGGAGCGTGCTCTCCTTTTGAATATTGTAATCGGAGAGGGTCCTCCCATCTTC 62722 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 | ||| || || || || || |||||||||||||| | || | || ||| ||||| Sbjct 62721 CAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCTTG 62662 Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 ||| || || | ||| | | | ||| ||| |||||||| |||| || || | | Sbjct 62661 GATCTTGCTCTTCA-CGTTGTCAATCGTGTCGGAGGACTCCACCTCCAGGGTAATGGTCT 62603 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| || || || || || ||||| ||||| Sbjct 62602 TTCCGGTGAGAGTCTTGACGAAGATCTGCAT 62572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429542087256623