Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20var._20RP-
2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq586 233 3e-56
seq405 111 2e-19
>seq586
Length=168373
Score = 233 bits (258), Expect = 3e-56
Identities = 597/901 (66%), Gaps = 16/901 (2%)
Strand=Plus/Plus
Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579
||||| ||||| || ||||||| |||||||||| |||||| || || | || | |
Sbjct 81215 TCAAACTCATCACCATAAACATCTGCCAAACCAGGGGCTTCATTGGGGCAGAACAGAGTC 81274
Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639
|| ||||| | || ||| || ||||| || |||||||| |||| || || ||
Sbjct 81275 CAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGCGCGTAGAAC 81334
Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699
||||| |||| ||| ||| || || || ||||| |||||| |||||||| |
Sbjct 81335 AGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAGGAACTCGAAG 81394
Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759
||||| | |||||| || || || || || || | | | || || || || |||||||||
Sbjct 81395 ATATCGGCATGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTGTTACCTCCC 81454
Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819
|| || | ||| || |||||||| || | || | | ||| |||| ||| ||||||||
Sbjct 81455 TGGTCGACATACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAG 81514
Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879
| ||||| || ||| ||| || || ||||| || || |||||
Sbjct 81515 GACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGGCCG 81574
Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939
|| || || || | || ||||| | ||||| || | ||||| ||||| |||||
Sbjct 81575 ATACCGCCAGCTGTCTTCGAGATCATGGCACAAGTCTTAAGGGTGTCGTAGATACCCTCA 81634
Query 76940 ATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGAC---ATTTGATGATGAACAGTT 76996
|| ||||| ||| |||| | | || | ||| |||| | || | || |||
Sbjct 81635 ATGCTATCCTCCTTCATATCGACGAGGA---AGCAAGACGCAAGCTGGGGTTGGGGAGTA 81691
Query 76997 CCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTAT 77056
|| ||||| |||| |||||||| ||||||||||| |||| | ||| | || | |||
Sbjct 81692 CCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTAG 81751
Query 77057 GTTTCAATAACTGCTTCTATATCCCATTG--ATGAATTCCTACAGCGACACGCATCAACA 77114
|| ||||| | ||| |||| ||| |||||| || || || |||||||||||||
Sbjct 81752 GTCTCAATGGCCTTTTCAATAT--TGTTGCCATGAATGCCAACCGCAACACGCATCAACA 81809
Query 77115 TATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAG 77174
||||| || || || || ||| ||| ||| || || ||| || || | |
Sbjct 81810 AGTGCTGCGGACGCTCAGCAACCTTGCCATTGATTCGCAGCAGGTAGGACCGCTCGAGTG 81869
Query 77175 TTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTT 77234
| || ||||| ||| ||||||| ||||| | || || | |||| | || || || |
Sbjct 81870 TCTTGAAACCGAAAAAGTTGTAGTTGAAGTCACGATCATATACAATAGCAGAGTTGAGCT 81929
Query 77235 TGTCCTTATATTTGGTAACAATATC-CATGACAGTGGTAGAAATAATTGGAGATCGTATT 77293
|| || ||| | ||||| || | | | | | ||||| ||||| | || ||
Sbjct 81930 CATCAGCATGTTTCATGACAATTTCATACGTCTCT-TTCGAAATCATTGGCG--CGGGTT 81986
Query 77294 CC--ATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGttttt 77351
| ||||| || |||||||||| | | ||| || || || | || |
Sbjct 81987 GCTTGTTTTTGGGGTTAACATAGTGGTACAGGTCCGAGATGACCAGAGAGAACTGCTTCT 82046
Query 77352 ttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGAT 77411
| |||| |||||| || || || |||||||| | ||||||| || ||||| || || |
Sbjct 82047 TGGTTTGCTTGTGGAGGTTGGACACGGCTATACGGGCAGCTAAGATGGCATAATCGGGGT 82106
Query 77412 G 77412
|
Sbjct 82107 G 82107
>seq405
Length=35189
Score = 111 bits (122), Expect = 2e-19
Identities = 179/257 (70%), Gaps = 3/257 (1%)
Strand=Plus/Minus
Query 46927 TCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATC 46986
|| ||||||||||| ||||| ||||| || ||||| || |||| || |||| | |
Sbjct 2276 TCCGAATGAATGTTCTCAATCATAATCTGGAAGCCGTAGAAGCATCGAGCCTCAGGCACC 2217
Query 46987 TGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCA 47046
|| ||||| | | || || || |||| |||||||| || ||||| ||| |||||
Sbjct 2216 TGCACCTCATTGCTGAAGCGCTCCAACAAGTTCTCATTAACGATTCCGTCAGAGGCAGCG 2157
Query 47047 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCA---GTTTATTCCAG 47103
|| || || | ||||| || ||||| |||||| | ||| | || ||||||
Sbjct 2156 AAGAAGGCAAGGACATGAGAGATGAAATAACGCTCATCGTCATTCAGACGGTTGTTCCAG 2097
Query 47104 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTT 47163
|| | | |||||| || | ||| | || || || |||||||| || || || |||||
Sbjct 2096 TCGTGCAGATCTTTGGAGAGATCAATCTCCTCGGCGGTCCAGAAGGAAGCTTCGGCTTTC 2037
Query 47164 TTATACATATTCCATAT 47180
|| ||||| | ||| ||
Sbjct 2036 TTGTACATTTGCCAAAT 2020
Score = 109 bits (120), Expect = 8e-19
Identities = 334/514 (65%), Gaps = 7/514 (1%)
Strand=Plus/Minus
Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398
|| ||||| ||||| ||||| ||||| || || || || || ||| | | || ||| ||
Sbjct 2919 TTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTCGTCTTTCCTGCAAGCGAGATACTT 2860
Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458
||||| || || || || || | | || | || || ||| | | | |
Sbjct 2859 TCCATGAAGTCGAAGGGGTTGGGAGAGTTGAAGTACTTCTTGTTTCCAAGAGCAACCAAC 2800
Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518
|| | ||| |||||||| || |||||| ||| | | | | ||||| || | |||
Sbjct 2799 AGCCGATCAGCAACGAACTCAATATACTGGCACATTAGCTTAGAGTTCATGCCCAGGAGA 2740
Query 46519 TTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATC--CGATATTA 46576
|| || ||||| || || | ||||| |||||||| | ||||| || ||||| ||
Sbjct 2739 GCAACAGGAAGAGCGTCTGTCAAGAACTCCTGTTCAATGGCCACAGCCTCAACGATAATA 2680
Query 46577 TCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAA 46636
|| || || || || |||| |||| || ||| | | || ||||
Sbjct 2679 TCCTCAATAACCTT--CTTGTCGGGGCGATGGTTCAAGTGAGAAAAGAGAAGGCAAGCAA 2622
Query 46637 AATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCA 46696
| || || || || || || | | || | ||||| || || ||||| |||||||
Sbjct 2621 AGTCTGTGTGTAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCAGGCA 2562
Query 46697 TTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTT 46756
| | |||||||| || ||||| || || | || ||||||||||| || || || || |
Sbjct 2561 TCAAGCCACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAAAAGATTCCCT 2502
Query 46757 CTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---GAATCCACC 46813
| ||||| ||||| || ||||| | || || || | | || |||| |||||| |
Sbjct 2501 CCACAGCGGCGAAGGCCACAAGGCGCTGAGCGAAAGTAGATTCCTTATCAGAAATCCATC 2442
Query 46814 TTTGAGCCCAATCAGCCTTTTTCTTTACACAAGG 46847
| ||||| | ||||| ||| | | ||||||
Sbjct 2441 TCATGGCCCACTGGGCCTTCTTCCTGATACAAGG 2408
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712928420262720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |