Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq586 233 3e-56 seq405 111 2e-19 >seq586 Length=168373 Score = 233 bits (258), Expect = 3e-56 Identities = 597/901 (66%), Gaps = 16/901 (2%) Strand=Plus/Plus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 ||||| ||||| || ||||||| |||||||||| |||||| || || | || | | Sbjct 81215 TCAAACTCATCACCATAAACATCTGCCAAACCAGGGGCTTCATTGGGGCAGAACAGAGTC 81274 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || ||||| | || ||| || ||||| || |||||||| |||| || || || Sbjct 81275 CAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGCGCGTAGAAC 81334 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 ||||| |||| ||| ||| || || || ||||| |||||| |||||||| | Sbjct 81335 AGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAGGAACTCGAAG 81394 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759 ||||| | |||||| || || || || || || | | | || || || || ||||||||| Sbjct 81395 ATATCGGCATGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTGTTACCTCCC 81454 Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819 || || | ||| || |||||||| || | || | | ||| |||| ||| |||||||| Sbjct 81455 TGGTCGACATACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAG 81514 Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879 | ||||| || ||| ||| || || ||||| || || ||||| Sbjct 81515 GACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGGCCG 81574 Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939 || || || || | || ||||| | ||||| || | ||||| ||||| ||||| Sbjct 81575 ATACCGCCAGCTGTCTTCGAGATCATGGCACAAGTCTTAAGGGTGTCGTAGATACCCTCA 81634 Query 76940 ATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGAC---ATTTGATGATGAACAGTT 76996 || ||||| ||| |||| | | || | ||| |||| | || | || ||| Sbjct 81635 ATGCTATCCTCCTTCATATCGACGAGGA---AGCAAGACGCAAGCTGGGGTTGGGGAGTA 81691 Query 76997 CCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTAT 77056 || ||||| |||| |||||||| ||||||||||| |||| | ||| | || | ||| Sbjct 81692 CCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTAG 81751 Query 77057 GTTTCAATAACTGCTTCTATATCCCATTG--ATGAATTCCTACAGCGACACGCATCAACA 77114 || ||||| | ||| |||| ||| |||||| || || || ||||||||||||| Sbjct 81752 GTCTCAATGGCCTTTTCAATAT--TGTTGCCATGAATGCCAACCGCAACACGCATCAACA 81809 Query 77115 TATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAG 77174 ||||| || || || || ||| ||| ||| || || ||| || || | | Sbjct 81810 AGTGCTGCGGACGCTCAGCAACCTTGCCATTGATTCGCAGCAGGTAGGACCGCTCGAGTG 81869 Query 77175 TTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTT 77234 | || ||||| ||| ||||||| ||||| | || || | |||| | || || || | Sbjct 81870 TCTTGAAACCGAAAAAGTTGTAGTTGAAGTCACGATCATATACAATAGCAGAGTTGAGCT 81929 Query 77235 TGTCCTTATATTTGGTAACAATATC-CATGACAGTGGTAGAAATAATTGGAGATCGTATT 77293 || || ||| | ||||| || | | | | | ||||| ||||| | || || Sbjct 81930 CATCAGCATGTTTCATGACAATTTCATACGTCTCT-TTCGAAATCATTGGCG--CGGGTT 81986 Query 77294 CC--ATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGttttt 77351 | ||||| || |||||||||| | | ||| || || || | || | Sbjct 81987 GCTTGTTTTTGGGGTTAACATAGTGGTACAGGTCCGAGATGACCAGAGAGAACTGCTTCT 82046 Query 77352 ttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGAT 77411 | |||| |||||| || || || |||||||| | ||||||| || ||||| || || | Sbjct 82047 TGGTTTGCTTGTGGAGGTTGGACACGGCTATACGGGCAGCTAAGATGGCATAATCGGGGT 82106 Query 77412 G 77412 | Sbjct 82107 G 82107 >seq405 Length=35189 Score = 111 bits (122), Expect = 2e-19 Identities = 179/257 (70%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 46927 TCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATC 46986 || ||||||||||| ||||| ||||| || ||||| || |||| || |||| | | Sbjct 2276 TCCGAATGAATGTTCTCAATCATAATCTGGAAGCCGTAGAAGCATCGAGCCTCAGGCACC 2217 Query 46987 TGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCA 47046 || ||||| | | || || || |||| |||||||| || ||||| ||| ||||| Sbjct 2216 TGCACCTCATTGCTGAAGCGCTCCAACAAGTTCTCATTAACGATTCCGTCAGAGGCAGCG 2157 Query 47047 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCA---GTTTATTCCAG 47103 || || || | ||||| || ||||| |||||| | ||| | || |||||| Sbjct 2156 AAGAAGGCAAGGACATGAGAGATGAAATAACGCTCATCGTCATTCAGACGGTTGTTCCAG 2097 Query 47104 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTT 47163 || | | |||||| || | ||| | || || || |||||||| || || || ||||| Sbjct 2096 TCGTGCAGATCTTTGGAGAGATCAATCTCCTCGGCGGTCCAGAAGGAAGCTTCGGCTTTC 2037 Query 47164 TTATACATATTCCATAT 47180 || ||||| | ||| || Sbjct 2036 TTGTACATTTGCCAAAT 2020 Score = 109 bits (120), Expect = 8e-19 Identities = 334/514 (65%), Gaps = 7/514 (1%) Strand=Plus/Minus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 || ||||| ||||| ||||| ||||| || || || || || ||| | | || ||| || Sbjct 2919 TTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTCGTCTTTCCTGCAAGCGAGATACTT 2860 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458 ||||| || || || || || | | || | || || ||| | | | | Sbjct 2859 TCCATGAAGTCGAAGGGGTTGGGAGAGTTGAAGTACTTCTTGTTTCCAAGAGCAACCAAC 2800 Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518 || | ||| |||||||| || |||||| ||| | | | | ||||| || | ||| Sbjct 2799 AGCCGATCAGCAACGAACTCAATATACTGGCACATTAGCTTAGAGTTCATGCCCAGGAGA 2740 Query 46519 TTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATC--CGATATTA 46576 || || ||||| || || | ||||| |||||||| | ||||| || ||||| || Sbjct 2739 GCAACAGGAAGAGCGTCTGTCAAGAACTCCTGTTCAATGGCCACAGCCTCAACGATAATA 2680 Query 46577 TCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAA 46636 || || || || || |||| |||| || ||| | | || |||| Sbjct 2679 TCCTCAATAACCTT--CTTGTCGGGGCGATGGTTCAAGTGAGAAAAGAGAAGGCAAGCAA 2622 Query 46637 AATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCA 46696 | || || || || || || | | || | ||||| || || ||||| ||||||| Sbjct 2621 AGTCTGTGTGTAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCAGGCA 2562 Query 46697 TTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTT 46756 | | |||||||| || ||||| || || | || ||||||||||| || || || || | Sbjct 2561 TCAAGCCACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAAAAGATTCCCT 2502 Query 46757 CTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---GAATCCACC 46813 | ||||| ||||| || ||||| | || || || | | || |||| |||||| | Sbjct 2501 CCACAGCGGCGAAGGCCACAAGGCGCTGAGCGAAAGTAGATTCCTTATCAGAAATCCATC 2442 Query 46814 TTTGAGCCCAATCAGCCTTTTTCTTTACACAAGG 46847 | ||||| | ||||| ||| | | |||||| Sbjct 2441 TCATGGCCCACTGGGCCTTCTTCCTGATACAAGG 2408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712928420262720