Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq630 131 4e-25 seq586 96.9 8e-15 >seq630 Length=388802 Score = 131 bits (144), Expect = 4e-25 Identities = 159/215 (74%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| ||||| || || || || |||||||| |||||||| | || || | ||||| Sbjct 62556 GAGGACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAATCAGACAAGGTACGGCCATC 62497 Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009 ||| || ||||| || || ||||| || | ||| || || | | ||| || ||||| Sbjct 62496 TTCAAGTTGCTTT--CCAGCAAAGATGAGACGCTGTTGATCAGGAGGGATACCCTCCTTA 62439 Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069 || || || || |||||| | || | | |||||||| ||||||||| | || ||| Sbjct 62438 TCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCTACTTCTAATGTGATA 62379 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || |||||||||||||| ||||||| ||||| Sbjct 62378 GTCTTTCCCGTGAGAGTCTTAACGAAGATTTGCAT 62344 Score = 104 bits (114), Expect = 5e-17 Identities = 154/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || || || |||||||| || || |||||||| ||||||| | ||| | ||||| Sbjct 62020 GAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAATCGGAAAGAGTGCGGCCATC 61961 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || || ||||| || | | ||||||||| | | ||| || ||||| || Sbjct 61960 CTCGAGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAGGAGGGATACCCTCCTTATC 61901 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTC--TGAACTCTCTACTTCAAGAGTAATA 152069 ||||| || |||||| | || | |||| || |||| || |||| || || Sbjct 61900 CTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGAC-CTCCAAG-GTGATG 61843 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||||||||||||||| ||||| | |||||| Sbjct 61842 GTCTTGCCCGTGAGAGTCTTGACGAAAATCTGCAT 61808 Score = 104 bits (114), Expect = 5e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 151913 CTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAA 151972 ||| ||||| || |||||||||| | || ||||||||||| | || || ||||| Sbjct 62763 CTCCTTTTGAATATTGTAATCGGAGAGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAA 62704 Query 151973 GATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGT 152032 ||| || | ||||||||| | | ||| || ||||| ||||| || || || || | Sbjct 62703 GATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCTTGGATCTTGCTCTTCACGTT 62644 Query 152033 CTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCAC 152092 || | |||| || ||| || || || ||||| || || || ||||||||||| || Sbjct 62643 GTCAATCGTGTCGGAGGACTCCACCTCCAGGGTAATGGTCTTTCCGGTGAGAGTCTTGAC 62584 Query 152093 GAAGACCTGCAT 152104 ||||| |||||| Sbjct 62583 GAAGATCTGCAT 62572 >seq586 Length=168373 Score = 96.9 bits (106), Expect = 8e-15 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 115629 TTCTATGCCATTTGGACATCTGATCTTTTTATGAAGCGAGTCAAGGCAAACGGAATGTGG 115688 ||||| || | ||||| ||||||| || ||||||||||| || | ||||| ||| Sbjct 81333 TTCTACGCGCTGTGGACCCCTGATCTGTTCATGAAGCGAGTTGAGTCCAACGGTGACTGG 81274 Query 115689 AGCCTCTTTTGTCCCAATGAAGCCCCTGGTCTTGATGATGTTTATGGTCCAGAGTTTGAG 115748 | || || || |||||||||||||||||| | | |||||||||||| |||||||| Sbjct 81273 ACTCTGTTCTGCCCCAATGAAGCCCCTGGTTTGGCAGATGTTTATGGTGATGAGTTTGAT 81214 Query 115749 AATCTTTACGAAAGGT 115764 |||||| ||| ||| Sbjct 81213 GCTCTTTATGAACGGT 81198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153810880386241