Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20var._20RP-
2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq630 131 4e-25
seq586 96.9 8e-15
>seq630
Length=388802
Score = 131 bits (144), Expect = 4e-25
Identities = 159/215 (74%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| ||||| || || || || |||||||| |||||||| | || || | |||||
Sbjct 62556 GAGGACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAATCAGACAAGGTACGGCCATC 62497
Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009
||| || ||||| || || ||||| || | ||| || || | | ||| || |||||
Sbjct 62496 TTCAAGTTGCTTT--CCAGCAAAGATGAGACGCTGTTGATCAGGAGGGATACCCTCCTTA 62439
Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069
|| || || || |||||| | || | | |||||||| ||||||||| | || |||
Sbjct 62438 TCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCTACTTCTAATGTGATA 62379
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || |||||||||||||| ||||||| |||||
Sbjct 62378 GTCTTTCCCGTGAGAGTCTTAACGAAGATTTGCAT 62344
Score = 104 bits (114), Expect = 5e-17
Identities = 154/215 (72%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| || || || |||||||| || || |||||||| ||||||| | ||| | |||||
Sbjct 62020 GAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAATCGGAAAGAGTGCGGCCATC 61961
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || || ||||| || | | ||||||||| | | ||| || ||||| ||
Sbjct 61960 CTCGAGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAGGAGGGATACCCTCCTTATC 61901
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTC--TGAACTCTCTACTTCAAGAGTAATA 152069
||||| || |||||| | || | |||| || |||| || |||| || ||
Sbjct 61900 CTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGAC-CTCCAAG-GTGATG 61843
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||||||||||||||| ||||| | ||||||
Sbjct 61842 GTCTTGCCCGTGAGAGTCTTGACGAAAATCTGCAT 61808
Score = 104 bits (114), Expect = 5e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 151913 CTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAA 151972
||| ||||| || |||||||||| | || ||||||||||| | || || |||||
Sbjct 62763 CTCCTTTTGAATATTGTAATCGGAGAGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAA 62704
Query 151973 GATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGT 152032
||| || | ||||||||| | | ||| || ||||| ||||| || || || || |
Sbjct 62703 GATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCTTGGATCTTGCTCTTCACGTT 62644
Query 152033 CTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCAC 152092
|| | |||| || ||| || || || ||||| || || || ||||||||||| ||
Sbjct 62643 GTCAATCGTGTCGGAGGACTCCACCTCCAGGGTAATGGTCTTTCCGGTGAGAGTCTTGAC 62584
Query 152093 GAAGACCTGCAT 152104
||||| ||||||
Sbjct 62583 GAAGATCTGCAT 62572
>seq586
Length=168373
Score = 96.9 bits (106), Expect = 8e-15
Identities = 103/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 115629 TTCTATGCCATTTGGACATCTGATCTTTTTATGAAGCGAGTCAAGGCAAACGGAATGTGG 115688
||||| || | ||||| ||||||| || ||||||||||| || | ||||| |||
Sbjct 81333 TTCTACGCGCTGTGGACCCCTGATCTGTTCATGAAGCGAGTTGAGTCCAACGGTGACTGG 81274
Query 115689 AGCCTCTTTTGTCCCAATGAAGCCCCTGGTCTTGATGATGTTTATGGTCCAGAGTTTGAG 115748
| || || || |||||||||||||||||| | | |||||||||||| ||||||||
Sbjct 81273 ACTCTGTTCTGCCCCAATGAAGCCCCTGGTTTGGCAGATGTTTATGGTGATGAGTTTGAT 81214
Query 115749 AATCTTTACGAAAGGT 115764
|||||| ||| |||
Sbjct 81213 GCTCTTTATGAACGGT 81198
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153810880386241
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |