Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20var._20RP-
2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq630 178 3e-39
seq615 134 3e-26
seq632 89.7 1e-12
seq606 87.8 4e-12
>seq630
Length=388802
Score = 178 bits (196), Expect = 3e-39
Identities = 180/229 (79%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-C 282931
||||||||||| || || |||||||| | ||| ||| |||||||| ||||| |||| |
Sbjct 62570 CCACCACGCAGACGGAGGACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAATCAGAC 62511
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || |||||||| || ||||| || || |||||||| | ||| ||||| ||| ||
Sbjct 62510 AAG-GTACGGCCATCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCAGGAGG 62452
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGA 283050
||||||||||| || |||||||| ||| || || | ||||| ||||| |||| || |
Sbjct 62451 GATACCCTCCTTATCCTGGATCTT-GCTCTTGACATTGTCGATGGTGTCTGAAGACTCTA 62393
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|||| | ||||| ||||| ||||| | |||||||||||| || |||||
Sbjct 62392 CTTCTAATGTGATAGTCTTTCCCGTGAGAGTCTTAACGAAGATTTGCAT 62344
Score = 143 bits (158), Expect = 6e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||| || || || ||||| || | || ||| || |||||||| || || | |
Sbjct 62034 CCACCACGAAGACGGAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAATCGGAA 61975
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| |||||||||||||| || || || || || || ||||| || || |||||| ||
Sbjct 61974 AGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAGGAGGG 61915
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
||||||||||| || || ||||| | || || | || |||||||| | |||||
Sbjct 61914 ATACCCTCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGACC 61855
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| | ||||| ||||| ||||| | |||||| ||||| ||||||||
Sbjct 61854 TCCAAGGTGATGGTCTTGCCCGTGAGAGTCTTGACGAAAATCTGCAT 61808
Score = 143 bits (158), Expect = 6e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||||||||| || || ||||| || | |||||| || ||||| || ||||| || |
Sbjct 62798 CCACCACGCAGACGCAGCACCAGGTGGAGCGTGCTCTCCTTTTGAATATTGTAATCGGAG 62739
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || | ||||| || | || || || || ||||| | ||| || |||||| ||
Sbjct 62738 AGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGG 62679
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| |||||||||||||||||| ||||| || ||| | || || ||||| || | || ||
Sbjct 62678 ATGCCCTCCTTGTCTTGGATC-TTGCTCTTCACGTTGTCAATCGTGTCGGAGGACTCCAC 62620
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || || || ||||| || || | |||||| ||||| ||||||||
Sbjct 62619 CTCCAGGGTAATGGTCTTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 62572
Score = 131 bits (144), Expect = 4e-25
Identities = 162/219 (74%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930
||||||||| || ||||| || || || | || ||| || || ||||| ||||| |
Sbjct 62343 ACCACCACGAAGACGAAGGACGAGGTGGAGAGTCGATTCCTTCTGAATGTTATAGTCGGA 62284
Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990
|||| |||||||||||||| | || || || || || |||| ||| || |||||| |
Sbjct 62283 CAAG-GTGCGGCCATCCTCCAACTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCAGGAG 62225
Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
| |||||||||||||| |||||||| | || ||| |||| || || || | ||| |
Sbjct 62224 GGATACCCTCCTTGTCCTGGATCTTCGACTTAACGTTATCAATGGTATCGCTGGATTCCA 62165
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089
| |||||||| || ||||| || || | ||||| ||||
Sbjct 62164 CCTCGAGAGTAATGGTCTTGCCAGTGAGGGTCTTGACGA 62126
>seq615
Length=220600
Score = 134 bits (148), Expect = 3e-26
Identities = 137/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| || ||||||||||| || |||||||||||||| || || || || || ||||||
Sbjct 21219 TTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 21160
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
| || || |||||| || |||||||||||||| |||||||| || || ||| | |||
Sbjct 21159 AGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 21100
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| ||||| | || || ||||| || || ||||||||||||| ||||| |||||
Sbjct 21099 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATAGTCTTACCCGTCAGGGTCTTGACGAA 21041
>seq632
Length=465644
Score = 89.7 bits (98), Expect = 1e-12
Identities = 130/181 (72%), Gaps = 2/181 (1%)
Strand=Plus/Plus
Query 315656 TAATCACCACCACCCCACCTCCGAAATTCTTAAGCGCCTCTGCCATGGCACCGAGACTCT 315715
|||| | || || ||||| ||||| |||| || |||| | || |||||| ||| |
Sbjct 307080 TAATGATAACGACACCACCCTCGAAAGTCTTGAGAGCCTTGGACAGGGCACCCAGAGAGT 307139
Query 315716 CGCGGTCCACAAAGTTGGTCGGCTCATCAAGAACGATGACGTGGGGTTGTTGCCATAGAG 315775
| ||||| | | ||||||| ||||| || || ||||||||||| || | ||||| |||
Sbjct 307140 CACGGTCGAGATAGTTGGTGGGCTCGTCGAGGACGATGACGTGAGGACGCTGCCA-CGAG 307198
Query 315776 C-GGCGCCGATAACGAGCTTTAGTTTTTGCCCACCAGACAGTCCACGGATGCGAGAATGA 315834
| |||| ||| |||| ||| | || ||||| ||||| || || || || || |||
Sbjct 307199 CAGGCGGCGAGGACGACCTTGACACGCTGACCACCGGACAGACCGCGCATACGGGAGTGA 307258
Query 315835 G 315835
|
Sbjct 307259 G 307259
>seq606
Length=198141
Score = 87.8 bits (96), Expect = 4e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||||||||| || || || || || | || || || ||||||||||||||||
Sbjct 90784 ACCACCACGCAGACGGAGCACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGA 90843
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || || || ||||| || || || || || ||||||| ||| || ||||| ||
Sbjct 90844 GAGGGTACGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGGGGG 90903
Query 282992 AATACCCTCCTTGTCT 283007
|| ||||||||||||
Sbjct 90904 GATTCCCTCCTTGTCT 90919
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046730200986834
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |