Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq405 87.8 2e-12 >seq405 Length=35189 Score = 87.8 bits (96), Expect = 2e-12 Identities = 332/516 (64%), Gaps = 10/516 (2%) Strand=Plus/Minus Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTC 23264 ||| ||||| || || || || |||||||| | || || || || ||||| || | Sbjct 2932 CATGACACCGGCCTTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTCGTCTTTCCTGC 2873 Query 23265 TAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATA-TACAGCTT---TAC 23320 | || ||| ||||||| || || || || || | || || | ||| ||| | | Sbjct 2872 AAGCGAGATACTTTCCATGAAGTCGAAGGGGTTGGGAGAGTTGAAGTACTTCTTGTTTCC 2813 Query 23321 ATGATAATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCAT 23380 | || | | || |||| ||| || || || |||||||| || ||||| | | | Sbjct 2812 AAGAGCAACC----AACAGCCGATCAGCAACGAACTCAATATACTGGCACATTAGCTTAG 2757 Query 23381 AGTTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAA 23440 |||| || || | || || |||| || || ||||| | |||||||| | Sbjct 2756 AGTTCATGCCCAGGAGAGCAACAGGAAGAGCGTCTGTCAAGAACTCCTGTTCAATGGCCA 2697 Query 23441 CAGCATCTTTAATTATTTGAACAATAAC-TTCTTCACTAGGTGGATATTTTAAATACTTA 23499 |||| || || || | ||||||| ||||| | || | || || || | | Sbjct 2696 CAGCCTCAACGATAATATCCTCAATAACCTTCTTGTCGGGGCG-ATGGTTCAAGTGAGAA 2638 Query 23500 AACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAA 23559 || | | || ||||| || ||||| || || || | | || | || || || Sbjct 2637 AAGAGAAGGCAAGCAAAGTCTGTGTGTAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAG 2578 Query 23560 AATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCG 23619 || || | || ||||| || || || || || | ||| || || | |||||| ||||| Sbjct 2577 AAAGTGAGACCAGGCATCAAGCCACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCA 2518 Query 23620 GAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTA 23679 || || || || ||||| ||||| || ||||||||||| || | | || || | | Sbjct 2517 GAGAAAAAGATTCCCTCCACAGCGGCGAAGGCCACAAGGCGCTGAGCGAAAGTAGATTCC 2458 Query 23680 TAATCAGAAATCCAtttttttGTCCAATTAGCCTTC 23715 | ||||||||||||| | | | ||| | |||||| Sbjct 2457 TTATCAGAAATCCATCTCATGGCCCACTGGGCCTTC 2422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521483626019400