Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20RP- 2014_20[genbank_20GCA_5F000731615.1_202014-07-18] 671 sequences; 27,355,096 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq630 152 1e-31 seq615 105 2e-17 >seq630 Length=388802 Score = 152 bits (168), Expect = 1e-31 Identities = 158/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || |||||||| || || || |||||| | ||||| || | ||| Sbjct 61811 CAGATTTTCGTCAAGACTCTCACGGGCAAGACCATCACCTTGGAGGTCGAGTCCAGCGAC 61870 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| ||||||||||| || || || |||||||| |||||||| Sbjct 61871 ACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCAGCAG 61930 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || ||||| || || |||||||| ||||| | |||||| ||||||||||| || Sbjct 61931 CGCTTGATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTTTCCGATTATAACATC 61990 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || ||||| || ||||| || ||| Sbjct 61991 CAGAAGGAATCTACTCTGCACCTGGTT 62017 Score = 145 bits (160), Expect = 2e-29 Identities = 158/207 (76%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || |||||||| ||||| || ||||| | || || || |||||| Sbjct 62347 CAAATCTTCGTTAAGACTCTCACGGGAAAGACTATCACATTAGAAGTAGAGTCTTCAGAC 62406 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| ||||| || || || |||||||| || || || Sbjct 62407 ACCATCGACAATGTCAAGAGCAAGATCCAGGATAAGGAGGGTATCCCTCCTGATCAACAG 62466 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || || ||||| || ||||| || || |||||||| | || |||| | ||||| || | Sbjct 62467 CGTCTCATCTTTGCTGGAAAGCAACTTGAAGATGGCCGTAC-CTTGTCTGATTACAATAT 62525 Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129 |||||| ||||| ||||||||||| || Sbjct 62526 CCAAAAGGAATCCACACTGCATCTGGT 62552 Score = 120 bits (132), Expect = 7e-22 Identities = 148/200 (74%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || ||||| || || || || || |||||||||||| | || ||||| | Sbjct 62126 TCGTCAAGACCCTCACTGGCAAGACCATTACTCTCGAGGTGGAATCCAGCGATACCATTG 62185 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | ||||| || ||||| |||||||| || || |||||||| |||||||| || || | Sbjct 62186 ATAACGTTAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTGA 62245 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGTCCAAAAA 178109 | ||||| || || ||| | || ||||| | || |||| |||| |||||| | || || Sbjct 62246 TTTTCGCTGGCAAGCAGTTGGAGGATGGCCGCAC-CTTGTCCGACTATAACATTCAGAAG 62304 Query 178110 GAATCAACACTGCATCTTGT 178129 ||||| || || || || || Sbjct 62305 GAATCGACTCTCCACCTCGT 62324 >seq615 Length=220600 Score = 105 bits (116), Expect = 2e-17 Identities = 116/153 (76%), Gaps = 6/153 (4%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || || || || || || || |||||||| || || ||| ||||| Sbjct 21040 TTTCGTCAAGACCCTGACGGGTAAGACTATTACCCTCGACGTTGAGTCGAGC---GACAC 21096 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| |||||||| || || ||||| || |||||||| || Sbjct 21097 CATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCG 21156 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078 || |||||||| || || ||||| || ||||| Sbjct 21157 CCTGATCTTCGCTGGTAAGCAGCTTGAGGATGG 21189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203720851297174