Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20fumigatus_20[genbank_20GCA_5F001599 455.1_202016-03-01] 26 sequences; 28,388,732 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq3 120 3e-22 seq7 100 2e-16 seq1 86.0 5e-12 >seq3 Length=3005802 Score = 120 bits (132), Expect = 3e-22 Identities = 153/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | ||||| || || || ||||| |||||| | |||||| ||||||| Sbjct 1935430 ACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAATCGGAAAGAGTGCGGCCATCCTCG 1935371 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || |||||| | || | |||||||| || ||||| || |||||||| || | Sbjct 1935370 AGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAGGAGGGATACCCTCCTTATCCTGA 1935311 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | ||||| || ||||||||| | ||| | || ||| Sbjct 1935310 ATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGACCTCCAAGGTGATGGTCTTG 1935251 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATGG 118740 || || ||||| || || ||||||||||||| Sbjct 1935250 CCCGTGAGAGTCTTGACGAAAATCTGCATGG 1935220 Score = 120 bits (132), Expect = 3e-22 Identities = 155/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||||| ||||| || ||| |||||||| ||||||||| | || | | ||| Sbjct 1936198 CAGCACCAGGTGGAGCGTGCTCTCCTTTTGAATATTGTAATCGGAGAGGGTCCTCCCATC 1936139 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || | ||| || |||||| |||||||||||||||| || ||||| |||||||||||||| Sbjct 1936138 TTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTC 1936079 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 | || || || || | || | ||||| | | ||| ||||| | ||| | || Sbjct 1936078 TTGGATCTTGCTCTTCACGTTGTCAATCGTGTCGGAGGACTCCACCTCCAGGGTAATGGT 1936019 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || ||||| ||||| || || || ||||||||| Sbjct 1936018 CTTTCCGGTGAGAGTCTTGACGAAGATCTGCATG 1935985 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || || || || |||||||| || ||| || ||||| |||||| | ||| Sbjct 1935733 GTGGAGAGTCGATTCCTTCTGAATGTTATAGTCGGACAAGGTGCGGCCATCCTCCAACTG 1935674 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || |||||| | || ||||||||||| || ||||| || ||||||||||| || || Sbjct 1935673 CTTGCCAGCGAAAATCAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTT 1935614 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 ||||| | || | ||| || || || ||||||| || | || ||||| || Sbjct 1935613 CGACTTAACGTTATCAATGGTATCGCTGGATTCCACCTCGAGAGTAATGGTCTTGCCAGT 1935554 Query 118715 CAGAGTTTTTAC 118726 || || || || Sbjct 1935553 GAGGGTCTTGAC 1935542 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| || | ||| || || ||||| || |||||||| || || || ||| || Sbjct 1935966 ACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAATCAGACAAGGTACGGCCATCTTCA 1935907 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || || |||||||| ||||||||||||| ||||| ||||| || |||||||| || Sbjct 1935906 AGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCAGGAGGGATACCCTCCTTATCCTGG 1935847 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||| | ||| || || | || | || || Sbjct 1935846 ATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCTACTTCTAATGTGATAGTCTTT 1935787 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || ||||| || || || || ||||| Sbjct 1935786 CCCGTGAGAGTCTTAACGAAGATTTGCAT 1935758 >seq7 Length=1968185 Score = 100 bits (110), Expect = 2e-16 Identities = 130/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || ||||||||||| ||||||| ||||| |||||| ||||| || |||||| |||| Sbjct 1069536 TTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 1069477 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670 || |||||||| || || || || ||||||||||| || || || || | ||| Sbjct 1069476 AGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 1069417 Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 118730 | |||||| | ||| || |||| ||| | || || || ||||| || || || ||| Sbjct 1069416 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAAA 1069357 >seq1 Length=3959504 Score = 86.0 bits (94), Expect = 5e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | || ||||| || || |||||||| || | || || ||||| Sbjct 2216359 CACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGACCGTCCTC 2216418 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || |||||| |||| ||||||||||| ||||| || || |||||||||||||| Sbjct 2216419 GAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGGGGGGATTCCCTCCTTGTCTGT 2216478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830262529992