Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20fumigatus_20[genbank_20GCA_5F001599 455.1_202016-03-01] 26 sequences; 28,388,732 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq3 136 5e-27 seq7 105 8e-18 >seq3 Length=3005802 Score = 136 bits (150), Expect = 5e-27 Identities = 162/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| ||||| || | |||||||||||||||||||||||||| | || |||| | | Sbjct 1936201 ACGCAGCACCAGGTGGAGCGTGCTCTCCTTTTGAATATTGTAATCGGAGAGGGTCCTCCC 1936142 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || | ||||||||||||||| ||||| ||||||||||| | || | || |||||| Sbjct 1936141 ATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTT 1936082 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 ||| ||| || || | ||| | | | ||||||| || ||||| || | || | Sbjct 1936081 GTCTTGGATCTTGCTCTTCA-CGTTGTCAATCGTGTCGGAGGACTCCACCTCCAGGGTAA 1936023 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || || || || ||||| || ||||| ||||| Sbjct 1936022 TGGTCTTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 1935986 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 |||| ||||| |||| |||||||| ||||||||||||| || || || | || || Sbjct 1935966 ACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAATCAGACAAGGTACGGCCATCTTCA 1935907 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 || ||||| ||||| || ||||| ||||| || || | || | | |||||| ||| | Sbjct 1935906 AGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCAGGAGGGATACCCTCCTTATCCTGG 1935847 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 || || |||| | | | ||||| || || || || | ||||| || || Sbjct 1935846 ATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCTACTTCTAATGTGATAGTCTTT 1935787 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || ||||| || ||||||||||| Sbjct 1935786 CCCGTGAGAGTCTTAACGAAGATTTGCAT 1935758 Score = 96.9 bits (106), Expect = 4e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || || ||||| | ||||| || | || || |||||||| |||||||| Sbjct 1935412 TCCTTCTGGATGTTATAATCGGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAA 1935353 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111 || | ||||||||||| | || | | |||||| ||| ||| | || | |||| | Sbjct 1935352 ATCAAGCGCTGCTGGTCAGGAGGGATACCCTCCTTATCC-TGAATCTTCGACTTGACATT 1935294 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||||| || || || || | |||||||| |||||||| || ||||| || Sbjct 1935293 GTCAATAGTGTCGCTGGACTCGACCTCCAAGGTGATGGTCTTGCCCGTGAGAGTCTTGAC 1935234 Query 43172 AAAGATTTGCAT 43183 || || ||||| Sbjct 1935233 GAAAATCTGCAT 1935222 Score = 84.2 bits (92), Expect = 3e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| ||||| || || || | || || || | || || | |||||| |||||||| Sbjct 1935720 TCCTTCTGAATGTTATAGTCGGACAAGGTGCGGCCATCCTCCAACTGCTTGCCAGCGAAA 1935661 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || ||||||||||| | || | | |||||||||| ||| || || | | Sbjct 1935660 ATCAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTAACGTTA 1935601 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | || ||||| |||||||| |||| || ||||| ||||| || || ||||| || Sbjct 1935600 TCAATGGTATCGCTGGATTCCACCTCGAGAGTAATGGTCTTGCCAGTGAGGGTCTTGAC 1935542 >seq7 Length=1968185 Score = 105 bits (116), Expect = 8e-18 Identities = 134/182 (74%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| ||||| ||||| || ||| || || | || || ||||||||||||||||| | Sbjct 1069538 CCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 1069479 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | || ||||||||||| | || | | |||||||||| ||| || |||| ||| | Sbjct 1069478 TCAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTG 1069420 Query 43114 CC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||||||||| || || |||| || ||||| || ||||| || ||||| || Sbjct 1069419 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 1069360 Query 43173 AA 43174 || Sbjct 1069359 AA 1069358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571817414159280