Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20fumigatus_20[genbank_20GCA_5F001599 455.1_202016-03-01] 26 sequences; 28,388,732 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq3 199 4e-46 seq7 86.0 6e-12 >seq3 Length=3005802 Score = 199 bits (220), Expect = 4e-46 Identities = 430/639 (67%), Gaps = 8/639 (1%) Strand=Plus/Plus Query 23342 TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGC 23401 ||||| || |||| || ||||| || |||| || ||||||||||| || ||||| | Sbjct 954047 TCAACTCGCTTCATGAACAGATCAGGGGTCCACAGGGCGTAGAACAGATCACGGGCTCTG 954106 Query 23402 ACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCAC 23461 || ||||| || ||| |||||| | ||||| || || || | || |||||||| Sbjct 954107 ACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAGGAACTCGAAGATATCGGCATGCCAA 954166 Query 23462 GGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGG 23521 ||||||||||||| ||||| ||||| || | ||| || || ||||| ||||| || | Sbjct 954167 GGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTGTTACCTCCCTGGTCGACATACCTA 954226 Query 23522 GCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCC 23581 || ||||||||| |||| | ||||| || || | |||||| || | || || || Sbjct 954227 GCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGA-GGACCCATTAGTGCC 954285 Query 23582 GCCACACT-CGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640 ||| | || ||| | || || | | |||||||| | || || || || | | Sbjct 954286 ACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGGCCGATACCGCCAGCTGT 954345 Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700 ||||| ||||| || || || || ||||||||||| ||||| ||||| ||||| || Sbjct 954346 CTTCGAGATCATGGCACAAGTCTTAAGGGTGTCGTAGATACCCTCAATGCTATCCTCCTT 954405 Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760 | |||| | ||| || || | | || | || ||| ||| | || |||||| || Sbjct 954406 CATATCGACGAGGAAGCAAGACGCAAGCTGGGGTTGGGGAGTACCAGCATTGAACAGAGT 954465 Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820 || || || || |||||| | ||||| || | ||| || || ||||| || Sbjct 954466 AGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTAGGTCTCAATGGCCTTTTC 954525 Query 23821 AATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCT---C 23877 ||| | | || || || || | || || ||||||| || || || || | || | Sbjct 954526 AATATTGTTGCCATGAATGCCAACCGCAACACGCATCAACAAGTGCTGCGGACGCTCAGC 954585 Query 23878 GACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATA 23937 ||| | ||| || ||| | ||| || || || | | || || || || ||| | Sbjct 954586 AACCTT---GCCATTGATTCGCAGCAGGTAGGACCGCTCGAGTGTCTTGAAACCGAAAAA 954642 Query 23938 GTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976 || ||||| ||||||||||| | || || || || || Sbjct 954643 GTTGTAGTTGAAGTCACGATCATATACAATAGCAGAGTT 954681 Score = 120 bits (132), Expect = 3e-22 Identities = 441/678 (65%), Gaps = 17/678 (3%) Strand=Plus/Plus Query 22109 TCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCCGTC 22168 || || |||||||| |||| | ||| | |||| || || || ||||| || ||| Sbjct 952760 TCAACAGTAAACTGGATGGGAGCGGAGGCAGCCATGGTACGCAGGTAGTACATTCCAGTC 952819 Query 22169 TTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGCAAG 22228 |||| |||||| |||||| | ||| || || || | || || | | ||| Sbjct 952820 TTCAAACCCATTTTCCACCCAGCAAAGTGCATACTGGTGAGCTTGCCCATAGTAGGCTCC 952879 Query 22229 TCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCATA 22288 | || || | |||| || ||| ||| || || || || || || ||||||||||| Sbjct 952880 TTCAGGTGAATGTTGAGAGATTGAGACTGGTCAATGAAAGCACCACGGTCGGCGGCCATC 952939 Query 22289 TTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCTAAC 22348 | | | ||||| || |||||||| ||||||||||| || | |||| || Sbjct 952940 TGCAGGATGGTACGTTGGGAGATTTCCCACACGGTCTTGTAGAGAGCCTTGATGTCGGCG 952999 Query 22349 GGTATCGATTCGA-TCCTCTGGACGGACCCGTTAT-TGTGTATGATCAAATTTTTAATCG 22406 || || | | || | | || ||||| || || || | ||||| ||||| || Sbjct 953000 GGAAT-GTTGGGAATGTTTTGAACGGAGCCACCATCTGCG-ATGATACGGTTTTTCATGT 953057 Query 22407 TATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGAA 22466 | || ||||| ||| | | || | ||| |||| || | |||| || || || | Sbjct 953058 TGTCCGACCACAGACCAAGGTCGACAAGATCCTTGAGAAGCCAAGGGTTAACGACCTGGA 953117 Query 22467 ACTCGCCGGACAAGA-CGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCA 22525 |||| || | ||||| | ||||| ||| ||||| || ||| | || || ||| |||| Sbjct 953118 ACTCACCAG-CAAGAACACGGCGAGAGTAGATGTTCGAGGTGTAAGGCTCAAAACATTCG 953176 Query 22526 TTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTT 22585 ||| ||||| ||||| ||| ||||| |||||||| |||| || | ||| Sbjct 953177 TTGAAGCCCAGAATCTGGCTGGTGCTTGCGGTGGGCATCGGTGCCACCAACAAACTGTTA 953236 Query 22586 CTCAAGCCGTGCTTTGAAATTTTACTCTT--GAGCATCGACCAGTCCCACAGATCGGACG 22643 | | ||||||| | ||| || ||| ||| ||| ||||||||| || || | | Sbjct 953237 CGAACACCGTGCTGGGCAATCTTCGCCTTCAGAGAATC--CCAGTCCCAGAGGTCCGTGG 953294 Query 22644 GCGTCACATTGTCCCACATATCGTATTG--CAACACGCCGCGACTCGCCGGGCTGCCTTC 22701 | || ||||||||||||| || || || || | | || || ||| ||| || Sbjct 953295 GGGTTC---TGTCCCACATATCATACTGGAGAATACCCTGAGAGACG--GGGGAGCCCTC 953349 Query 22702 GTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTA 22761 ||| ||||| || |||||| | | ||| || || || || ||| || |||| Sbjct 953350 GTAAGTTTCATAAGGACCAAACTCCTTGGCCAGCTCACAAGATGCAGTCAAAGCACCGTG 953409 Query 22762 ATATATAGTCTCGAAGAT 22779 ||| || ||||| ||||| Sbjct 953410 ATAGATGGTCTCAAAGAT 953427 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| |||||||| |||||||| || ||||| || |||||| | || || || | Sbjct 1935221 CATGCAGATTTTCGTCAAGACTCTCACGGGCAAGACCATCACCTTGGAGGTCGAGTCCAG 1935280 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | | || | ||||| || || ||| ||||| || | || || ||||| Sbjct 1935281 CGACACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCA 1935340 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| | || ||||||||||| ||| | || || ||| | ||||||||| Sbjct 1935341 GCAGCGCTTGATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTTTCCGATTATAA 1935400 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || ||||| ||||| || ||||| || Sbjct 1935401 CATCCAGAAGGAATCTACTCTGCACCTGGTTCT 1935433 Score = 98.7 bits (108), Expect = 9e-16 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||| ||||| || || ||||| || || || |||| || ||| | ||| | | | Sbjct 1935540 TCGTCAAGACCCTCACTGGCAAGACCATTACTCTCGAGGTGGAATCCAGCGATACCATTG 1935599 Query 31263 AAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAA 31322 | | || || || || ||||||||| || | || || |||||||||||||| | Sbjct 1935600 ATAACGTTAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTGA 1935659 Query 31323 TATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAG 31382 | ||||||||||| |||||||| || || || ||| ||||||||||| || | Sbjct 1935660 TTTTCGCTGGCAAGCAGTTGGAGGATGGCCGCACCTTGTCCGACTATAACATTCAGAAGG 1935719 Query 31383 AATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||||| || || || ||| | || | || |||| Sbjct 1935720 AATCGACTCTCCACCTCGTCCTTCGTCTTCGTGGTGGTA 1935758 Score = 98.7 bits (108), Expect = 9e-16 Identities = 153/216 (71%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| |||||||| || || || || || ||| | || || || | || Sbjct 1935985 CATGCAGATCTTCGTCAAGACTCTCACCGGAAAGACCATTACCCTGGAGGTGGAGTCCTC 1936044 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAG-AATAGCG--GACAAGGAAGGCGTGCCGCCCGA 31308 ||||| | || | || || ||| || | | |||||||| ||| | || || || Sbjct 1936045 CGACACGATTGACAACGTGAA---GAGCAAGATCCAAGACAAGGAGGGCATCCCTCCTGA 1936101 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 |||||||||||| || |||||||| || ||||||||||| | ||| | |||||| Sbjct 1936102 CCAGCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGGAGGACCCTCTCCGATTA 1936161 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || |||||||| || || || || ||||| || Sbjct 1936162 CAATATTCAAAAGGAGAGCACGCTCCACCTGGTGCT 1936197 >seq7 Length=1968185 Score = 86.0 bits (94), Expect = 6e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 |||||| ||||| ||||| || || || || ||| |||||||||| || ||||| | Sbjct 1069357 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCAT 1069416 Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 ||| | ||||| | || ||||||||| || | || || ||||||||||| || Sbjct 1069417 CGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCAGCAGCGCCT 1069476 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 || |||||||| || ||| | || || || ||||||| || |||||||| || Sbjct 1069477 GATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATTCAGAA 1069536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766255125920