Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20fumigatus_20[genbank_20GCA_5F001599 455.1_202016-03-01] 26 sequences; 28,388,732 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2 125 1e-23 seq3 116 7e-21 >seq2 Length=3755792 Score = 125 bits (138), Expect = 1e-23 Identities = 330/495 (67%), Gaps = 18/495 (4%) Strand=Plus/Plus Query 101852 ATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGAT----GCAAAGCAATA-ACGATTTGG 101906 |||| |||||||| |||||||| || | ||||| | ||| ||| || ||| | Sbjct 649826 ATCAGGAAGAAGGCCCAGTGGGCCATGAGATGGATTTCTGATAAGGAATCTAC--TTTCG 649883 Query 101907 CGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCAT 101966 | | | |||| ||||| || || || || |||||||| || ||| | || || | Sbjct 649884 CTCAGCGCCTTGTGGCCTTCGCCGCTGTGGAGGGAATCTTTTTCTCTGGATCTTTTGCTT 649943 Query 101967 CCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCA 102026 |||| |||||| | ||||| | || | ||||||||||||| | |||||| ||| ||| Sbjct 649944 CCATCTTCTGGCTGAAGAAGCGTGGCTTGATGCCTGGTCTCACTTTCTCCAACGAGCTCA 650003 Query 102027 TTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTG 102086 | ||| | ||||| || || || |||||||| ||| | || || | || Sbjct 650004 TCTCTCGTGACGAGGGACTGCACACAGACTTTGCTTGCCTTCTCTTTTCTCA---CTTGA 650060 Query 102087 TTGAT-ACCCCATCAAGAGAAAGG--ATTCTTGAAATTGTCACTGAAGCCGTCCGAATTG 102143 || |||| |||| |||| ||| || ||| || ||| || || |||| Sbjct 650061 ACCATCGCCCCGACAAG---AAGGTTATTGAGGATATTATCGTTGAGGCTGTGGCCATTG 650117 Query 102144 AACAAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGA 102203 |||| || || | |||| | || |||||| | |||| ||||||| ||| | | Sbjct 650118 AACAGGAGTTCTTGACAGACGCTCTTCCTGTTGCTCTCCTGGGCATGAACTCTAAGCTAA 650177 Query 102204 TGAGCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGC 102263 || ||||||| ||||| || || || ||| || ||||||| | ||| | ||| Sbjct 650178 TGTGCCAGTATATTGAGTTCGTTGCTGATCGGCTGTTGGTTGCTCTTGGAAACAAGAAGT 650237 Query 102264 ACTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCG-AGAATAAGACC 102322 ||| || | ||||||||||| |||||||| | ||| || || | || | ||||| Sbjct 650238 ACTTCAACTCTCCCAACCCCTTCGACTTCATGGAAAGTATCTCGCTTGCAGGA-AAGACG 650296 Query 102323 AACTTTTTTGAAAAG 102337 ||||| ||||| ||| Sbjct 650297 AACTTCTTTGAGAAG 650311 >seq3 Length=3005802 Score = 116 bits (128), Expect = 7e-21 Identities = 188/268 (70%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTA 94833 |||| || | ||||| || ||||| ||||| ||||| || || |||||| || Sbjct 954317 TGAACGTTAAGGCCGATACCGCCAGCTGTCTTCGAGATCATGGCACAAGTCTTAAGGGTG 954376 Query 94834 TCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGG 94893 || || ||||||||||||||||| || | | | | |||||||| || | ||| ||| Sbjct 954377 TCGTAGATACCCTCAATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGCAAGCTGG 954436 Query 94894 GGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGAC 94953 ||| | || ||| ||| ||||| || || |||||||| || || || | | ||| Sbjct 954437 GGTTGGGGAGTACCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGAC 954496 Query 94954 ATGAGATCATATGTTTCAATGACAGATTTGATGTCTGAT-CCGTGAATGCCGACAGCCAC 95012 ||||| | || || |||||| | || || | || | || |||||||| || || || Sbjct 954497 ATGAGGTGGTAGGTCTCAATGGCCTTTTCAATAT-TGTTGCCATGAATGCCAACCGCAAC 954555 Query 95013 ACGCATAATCATGTCCTGAGGGCGCTCA 95040 |||||| | || || ||| || |||||| Sbjct 954556 ACGCATCAACAAGTGCTGCGGACGCTCA 954583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583670344830