Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20fumigatus_20[genbank_20GCA_5F001599 455.1_202016-03-01] 26 sequences; 28,388,732 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq3 226 4e-54 >seq3 Length=3005802 Score = 226 bits (250), Expect = 4e-54 Identities = 593/899 (66%), Gaps = 12/899 (1%) Strand=Plus/Plus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 || ||||| || || ||||||| | || ||||| ||| | || || | || | | Sbjct 953972 TCAAACTCATCACCATAAACATCTGCCAAACCAGGGGCTTCATTGGGGCAGAACAGAGTC 954031 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980 || || || | || ||||| ||||| || |||||||| |||| || || || Sbjct 954032 CAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGGGCGTAGAAC 954091 Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040 ||||| | || ||| ||||| || || ||||| |||||| |||||| | | Sbjct 954092 AGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAGGAACTCGAAG 954151 Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100 ||||| | |||||| || || | ||| || || | | | || || || ||||| |||||| Sbjct 954152 ATATCGGCATGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTGTTACCTCCC 954211 Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160 || || | || ||||| ||||| || | || | | ||| |||| |||||| || || Sbjct 954212 TGGTCGACATACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAG 954271 Query 80161 GTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 80220 | ||||| || || || ||| || ||||||| || || || || Sbjct 954272 GACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGGCCG 954331 Query 80221 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG-TATCATAGATGCCCTC 80279 || || || || | || ||||| | || || || |||| | | || ||||| ||||| Sbjct 954332 ATACCGCCAGCTGTCTTCGAGATCATGGCACAA-GTCTTAAGGGTGTCGTAGATACCCTC 954390 Query 80280 TATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGAC---ATTTGGTGACGACTAGT 80336 |||||||| || |||| | | || || || |||| | ||| | | ||| Sbjct 954391 AATGCTATCCTCCTTCATATCGACGAGGAAGCA---AGACGCAAGCTGGGGTTGGGGAGT 954447 Query 80337 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTA 80396 || ||||| || | ||||||||||| || || || |||| | ||||| || | ||| Sbjct 954448 ACCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTA 954507 Query 80397 CGTCTCAATAGCTGATTCTATATCCCATTG--ATGAATTCCTACCGCGACACGCATTAAC 80454 |||||||| || ||| |||| ||| |||||| || ||||| |||||||| ||| Sbjct 954508 GGTCTCAATGGCCTTTTCAATAT--TGTTGCCATGAATGCCAACCGCAACACGCATCAAC 954565 Query 80455 ATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAA 80514 | |||||| || | ||| | | |||| ||| ||| || || ||| || || | Sbjct 954566 AAGTGCTGCGGACGCTCAGCAACCTTGCCATTGATTCGCAGCAGGTAGGACCGCTCGAGT 954625 Query 80515 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGT 80574 || || ||||| ||| ||||||| ||||| || || || | |||| | |||||||| Sbjct 954626 GTCTTGAAACCGAAAAAGTTGTAGTTGAAGTCACGATCATATACAATAGCAGAGTTGAGC 954685 Query 80575 TTATCCTTATATTTGTTAACTACATCCATGGTGATACTTGAAATAATCGGAGAATGTTTC 80634 | ||| || ||| | || | || || | ||||| || || | ||| | Sbjct 954686 TCATCAGCATGTTTCATGACAATTTCATACGTCTCTTTCGAAATCATTGGCGCGGGTTGC 954745 Query 80635 CCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttttt 80694 ||||| || |||||||||| | | | ||| || || | || | || || Sbjct 954746 TTGTTTTTGGGGTTAACATAGTGGTACAGGTCCGAGATGACCAGAGAGAACTGCTTCTTG 954805 Query 80695 GTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753 |||| |||||| || || || |||||||| | ||| ||||| ||||||||||| || || Sbjct 954806 GTTTGCTTGTGGAGGTTGGACACGGCTATACGGGCAGCTAAGATGGCATAATCGGGGTG 954864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268566562640