Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20fumigatus_20[genbank_20GCA_5F001599 455.1_202016-03-01] 26 sequences; 28,388,732 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq3 132 5e-26 seq2 132 5e-26 seq7 116 3e-21 seq1 113 4e-20 >seq3 Length=3005802 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||||||||| | || | || |||||||||||| ||||||||| Sbjct 1936212 CCACCACGCAGACGCAGCACCAGGTGGAGCGTGCTCTCCTTTTGAATATTGTAATCGGAG 1936153 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| | | || || | |||||| || ||| |||| | |||||||||||| |||||| Sbjct 1936152 AGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGG 1936093 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | || | || |||| |||||| | Sbjct 1936092 ATGCCCTCCTTGTCTTGGATCTTGCTCTTCACGTTGTCAATCGTGTCGGAGGACTCCACC 1936033 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||||| ||| || ||||| ||||| || ||||| ||||||||| Sbjct 1936032 TCCAGGGTAATGGTCTTTCCGGTGAGAGTCTTGACGAAGATCTGCATG 1935985 Score = 129 bits (142), Expect = 6e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || | || | || || ||||| || ||||| |||||| Sbjct 1935449 GCCACCACGAAGACGGAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAATCGGA 1935390 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| ||||| ||||||||||| ||| | || || ||||||||||| ||||| Sbjct 1935389 AAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAGGAGG 1935330 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || || || || ||| ||||| | || | ||| ||| ||||||||| Sbjct 1935329 GATACCCTCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGAC 1935270 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | ||| || || || ||||| || ||||||||||||||| Sbjct 1935269 CTCCAAGGTGATGGTCTTGCCCGTGAGAGTCTTGACGAAAATCTGCATG 1935221 Score = 113 bits (124), Expect = 4e-20 Identities = 155/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | ||||| ||||| |||||||| || ||| | Sbjct 1935756 CCACCACGAAGACGAAGGACGAGGTGGAGAGTCGATTCCTTCTGAATGTTATAGTCGGAC 1935697 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| | ||||||||| ||| | || | |||||||||||| |||||| Sbjct 1935696 AAGGTGCGGCCATCCTCCAACTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCAGGAGGG 1935637 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||| | | || | |||||| |||| || | Sbjct 1935636 ATACCCTCCTTGTCCTGGATCTTCGACTTAACGTTATCAATGGTATCGCTGGATTCCACC 1935577 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 |||| |||| ||| || || || || || || |||| Sbjct 1935576 TCGAGAGTAATGGTCTTGCCAGTGAGGGTCTTGACGA 1935540 >seq2 Length=3755792 Score = 132 bits (146), Expect = 5e-26 Identities = 306/458 (67%), Gaps = 15/458 (3%) Strand=Plus/Plus Query 46144 ACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGT 46203 |||||||| |||| | |||||||| || ||||||||| ||||||| ||||| | Sbjct 649877 ACTTTCGCTCAGCGCCTTGTGGCCTTCGCCGCTGTGGAGGGAATCTTTTTCTCTGGATCT 649936 Query 46204 TTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAAC 46263 ||||| ||||||| | | || | ||| | ||||| || || || || |||| Sbjct 649937 TTTGCTTCCATCTTCTGGCTGAAGAAGCGTGGCTTGATGCCTGGTCTCACTTTCTCCAAC 649996 Query 46264 GAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACT 46323 ||||| || || || |||||||| ||||| || |||||||| || || || | || Sbjct 649997 GAGCTCATCTCTCGTGACGAGGGACTGCACACAGACTTTGCTTGCCTTCTCTTTT---CT 650053 Query 46324 CGCGTGCACGACAAGCTTGCGCCCGACACCGTGCT----GAGCATGTTCAAG--GAGGCG 46377 | | || || | | || ||||||| | | ||| || || | ||||| Sbjct 650054 CACTTGAACCA-----TCGC-CCCGACAAGAAGGTTATTGAGGATATTATCGTTGAGGCT 650107 Query 46378 GTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAAC 46437 ||||||||||| ||||||| || || | ||| || || | ||| || |||||||||||| Sbjct 650108 GTGGCCATTGAACAGGAGTTCTTGACAGACGCTCTTCCTGTTGCTCTCCTGGGCATGAAC 650167 Query 46438 GCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCAC 46497 | || ||||||| | || || ||||| || || || || ||| | || ||| Sbjct 650168 TCTAAGCTAATGTGCCAGTATATTGAGTTCGTTGCTGATCGGCTGTTGGTTGCTCTTGGA 650227 Query 46498 CAGCCGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAG 46557 | |||| | || || | | ||| || || || || ||| | | ||||| || | Sbjct 650228 AACAAGAAGTACTTCAACTCTCCCAACCCCTTCGACTTCATGGAAAGTATCTCGCTTGCA 650287 Query 46558 GGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 || || || || || || || ||||| || || || || Sbjct 650288 GGAAAGACGAACTTCTTTGAGAAGCGTGTTGGTGACTA 650325 >seq7 Length=1968185 Score = 116 bits (128), Expect = 3e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| ||||||||||| ||||||| |||||| ||||| |||||||| || ||| ||| Sbjct 1069538 CCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 1069479 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | ||||||||||| || || || || || ||||| ||| || ||||| | | Sbjct 1069478 TCAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGT 1069419 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || ||| | ||||| | ||||| ||||| ||| ||||| || || || || |||| Sbjct 1069418 CGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 1069359 Query 131225 AA 131226 || Sbjct 1069358 AA 1069357 >seq1 Length=3959504 Score = 113 bits (124), Expect = 4e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| ||||| | || | |||||||||||| || |||||||| || Sbjct 2216342 CCACCACGCAGACGGAGCACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAG 2216401 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || |||||| ||||||||||| ||| |||| | |||||||||||| || ||| Sbjct 2216402 AGGGTACGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGGGGGG 2216461 Query 131128 ATTCCTTCTTTGTCGGT 131144 ||||| || ||||| || Sbjct 2216462 ATTCCCTCCTTGTCTGT 2216478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012646595840