Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20fumigatus_20[genbank_20GCA_5F001599 455.1_202016-03-01] 26 sequences; 28,388,732 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq2 100 3e-16 >seq2 Length=3755792 Score = 100 bits (110), Expect = 3e-16 Identities = 199/289 (69%), Gaps = 7/289 (2%) Strand=Plus/Minus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||||||||| || | ||| || || | || ||||| | ||||| || || ||| Sbjct 649718 ATGTATGTATCAATCAGCAGGGAGTATGTCTCCGAATGAATGTTCTCAATCATGATCTGG 649659 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTC-TTG-AGAAAATCTCTCTACGA 93479 || |||||||| |||| ||| || | | |||||| || ||| ||| ||| | || | Sbjct 649658 AAGCCGTAGAAGCATCGAGCCTCAGGCACCTGCACCTCATTGCTGAAGCGCTC-CAACAA 649600 Query 93480 GATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAAT 93539 | || ||||| || || || || || || || || || || | | ||| || |||| Sbjct 649599 G-TTCTCATTAACGATTCCGTCAGAGGCAGCGAAGAAGGCAAGGACATGAGAGATGAAAT 649541 Query 93540 GTTTCTCATCATCTTT---AAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTT 93596 |||||| || || | | || | ||| ||| |||||||| || ||||| | | Sbjct 649540 AACGCTCATCGTCATTCAGACGGTTGTTCCAGTCGTGCAGATCTTTGGAGAGATCAATCT 649481 Query 93597 CTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATAT 93645 | ||| | ||||| || || ||||| ||||| |||||||| | ||| || Sbjct 649480 CCTCGGCGGTCCAGAAGGAAGCTTCGGCTTTCTTGTACATTTGCCAAAT 649432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860619020240