Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20fumigatus_20[genbank_20GCA_5F001599 455.1_202016-03-01] 26 sequences; 28,388,732 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq2 125 1e-23 seq12 100 6e-16 >seq2 Length=3755792 Score = 125 bits (138), Expect = 1e-23 Identities = 298/440 (68%), Gaps = 24/440 (5%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 || ||||| || | ||| || | || ||||| |||||||||||||||||||| | Sbjct 650307 TCAAAGAAGTTCGTCTTTCCTGCAAGCGAGATACTTTCCATGAAGTCGAAGGGGTTGGGA 650248 Query 251623 GCATTG---TACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCC 251679 | ||| |||| |||| | ||||| || || || | || || || || ||||| Sbjct 650247 GAGTTGAAGTACTTCTTG---TTTCCAAGAGCAACCAACAGCCGATCAGCAACGAACTCA 650191 Query 251680 AGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAG 251739 | |||||| | ||| || | |||||||||||| | | | | ||||| || || Sbjct 650190 ATATACTGGCACATTAGCTTAGAGTTCATGCCCAGGAGAGCAACAGGAAGAGCGTCTGTC 650131 Query 251740 ATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTG--TGCCA 251794 | ||| |||| ||| |||| || ||||| | | ||| ||| | |||| || | Sbjct 650130 AAGAACTCCTGTTCAATGGCCACAGCCTCAACGATAATATCCTCAATAACCTTCTTGTCG 650071 Query 251795 GAGACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGC---CAAACTGTTGGTGCAGAC 251851 | | | || | || || |||| | || || || |||| | | |||||| | Sbjct 650070 GGGCGA---TGGT-TCAAG---TGAGAAAAG-AGAAGGCAAGCAAAGTCTGTGTGCAGTC 650019 Query 251852 CCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCC 251911 ||||||| ||| ||||| ||||||||| | | || |||||||||| ||||| ||| Sbjct 650018 CCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCAGGCATCAAGCCACGCTTCT 649959 Query 251912 TGAGCCAGAAGATTGC-GCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCAT 251970 | ||||||||||| | ||||||| |||||||||| | | ||||| ||| | | Sbjct 649958 TCAGCCAGAAGATGGAAGCAAAAG-ATCCAGAGAAAAAGATTCCCTCCACAGCGGCGAAG 649900 Query 251971 GCAACAAGGCGCTCAGCAAA 251990 || |||||||||| ||| || Sbjct 649899 GCCACAAGGCGCTGAGCGAA 649880 >seq12 Length=928831 Score = 100 bits (110), Expect = 6e-16 Identities = 172/244 (70%), Gaps = 12/244 (5%) Strand=Plus/Plus Query 280649 CAAGAATGTTGAGGACCA-TATGACCAAGCTGGGTCTGGACCCCGA----GTTTACAACT 280703 |||| | |||||| ||| | || |||| | ||||| || |||| |||| || Sbjct 583295 CAAGGAGATTGAGGCCCACTGTG-CCAACTTCGGTCTCGATGCCGAACTCGTTT----CT 583349 Query 280704 CACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GC 280762 |||||||| || |||||||| || || || ||| ||||| | ||| ||| || || Sbjct 583350 CACTCTCGTATGCGCGGTCTGTCCGGTGGTCAGCGTGTCAAGGTCGTCCTCGCCGCCTGC 583409 Query 280763 TCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822 || |||||| | |||||||| ||||| ||||||||||| ||||||||||| ||||| || Sbjct 583410 TC-GTGGCAGCGTCCTCACGTCATCGTCCTCGACGAGCCCACCAACTATCTCGACCGTGA 583468 Query 280823 GAGCCTGGGCGCTCTGAGTGCTGCTCTGGACACATTTGGCGGCGGCGTCGTAGTCATTTC 280882 ||||| || ||| ||||| | || || | || || ||||| ||||| | Sbjct 583469 CTCTCTGGGTGCCCTGTCCAAGGCTCTCAAGACTTTCGAGGGTGGTGTCGTTATCATTAC 583528 Query 280883 TCAC 280886 ||| Sbjct 583529 CCAC 583532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836457601866