Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20fumigatus_20[genbank_20GCA_5F001599 455.1_202016-03-01] 26 sequences; 28,388,732 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq3 141 2e-28 seq2 131 3e-25 >seq3 Length=3005802 Score = 141 bits (156), Expect = 2e-28 Identities = 325/479 (68%), Gaps = 18/479 (4%) Strand=Plus/Plus Query 244970 GGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATC 245029 ||||| | ||| |||| || ||| | || || | || |||||| || || ||| || Sbjct 954017 GGGCAGAACAGAGTCCAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTC 954076 Query 245030 CAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGC--TCGTCCGAGCCAGTGTTCTTCCTCA 245087 || ||||| | ||| || || | || ||||| || ||| || |||||| | | Sbjct 954077 CACAGGGCGTAGAACAGATCACGGG--CTCTGACTTCCTCCTTACCGTGGTTCTTGCGAA 954134 Query 245088 GCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGG 245147 | |||| || || |||| ||| | ||||| ||||| | ||| | ||| | ||||| | Sbjct 954135 GATCCAGGAACTCGAAGATATCGGCATGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAG 954194 Query 245148 GCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTA 245206 | |||||||| ||||||||||| || ||| | || | |||||| | ||| || | Sbjct 954195 GGCGCTTGTTACCTCCCTGGTCGACATACCTAGC-AGTGTTGTTGAACACGCGAAGCATG 954253 Query 245207 GGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGG 245266 || || || ||||||||| || || ||||| ||||||| ||| || | | || Sbjct 954254 GGAACAATACCGTTAGAGGACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCAC---GG 954310 Query 245267 TTGCTGATGGAC----ATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTT 245322 ||| | || || | ||| | ||||| || ||| ||||| | ||| || |||| Sbjct 954311 ATGC-GGTGAACGTTAAGGCCGATACCGCCAGCTGTCTTCGAGATCATGGCACAAGTCTT 954369 Query 245323 GATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGA 245382 | |||||| || ||||| ||||| ||| |||||| | || || ||||| || | Sbjct 954370 AAGGGTGTCGTAGATACCCTCAATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGC 954429 Query 245383 CAGCTGGGGCTTGGGGCTGCACGAG--TTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 |||||||| |||||| | || || ||||||||||| || || || || ||||| Sbjct 954430 AAGCTGGGG-TTGGGG-AGTACCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTA 954486 >seq2 Length=3755792 Score = 131 bits (144), Expect = 3e-25 Identities = 296/442 (67%), Gaps = 5/442 (1%) Strand=Plus/Plus Query 42705 CTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTC 42764 || || ||||| |||| || ||||| ||||| ||||| || | || || ||||||||| Sbjct 649892 CTTGTGGCCTTCGCCGCTGTGGAGGGAATCTTTTTCTCTGGATCTTTTGCTTCCATCTTC 649951 Query 42765 TGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824 ||||| ||| || | | |||||| || ||||| ||||| ||||| |||||| | Sbjct 649952 TGGCTGAAGAAGCGTGGCTTGATGCCTGGTCTCACTTTCTCCAACGAGCTCATCTCTCGT 650011 Query 42825 GACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAG 42884 |||||||| ||||| | |||||||| ||||| || || || ||| | | || Sbjct 650012 GACGAGGGACTGCACACAGACTTTGCTTGCCTTCTCTTTTC---TCACTTGAACCATCGC 650068 Query 42885 CCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTC 42944 ||| ||| || | || || ||| ||||| |||| || || |||||||| Sbjct 650069 CCCGACAAGAAGGTTATTGAGGATATTATCGTTGAGGCTGTGGCCATTGAACAGGAGTTC 650128 Query 42945 CTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTAC 43004 | || | | || || || | || | ||||||||| | || |||||| |||| Sbjct 650129 TTGACAGACGCTCTTCCTGTTGCTCTCCTGGGCATGAACTCTAAGCTAATGTGCCAGTAT 650188 Query 43005 ATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACAC 43063 || ||| ||| || || | || | || | ||| || | || |||| | Sbjct 650189 ATTGAGTTCGTTGCTGATCGGCTGTTGGTTGCTCTTGGAAACAAGAAG-TACTTCAACTC 650247 Query 43064 GCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGA 43123 || |||||||||||| ||||| | |||||| | | || ||||| ||||| || || Sbjct 650248 TCCCAACCCCTTCGACTTCATGGAAAGTATCTCGCTTGCAGGAAAGACGAACTTCTTTGA 650307 Query 43124 GAAGCGCGTCGCCGACTACCAG 43145 |||||| || | ||||||||| Sbjct 650308 GAAGCGTGTTGGTGACTACCAG 650329 Score = 113 bits (124), Expect = 9e-20 Identities = 202/289 (70%), Gaps = 7/289 (2%) Strand=Plus/Plus Query 42309 ATGTACAAGAAGGC-GCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGA 42367 ||||||||||| || | || | ||| ||||||||||||||||||||| || |||| || Sbjct 649441 ATGTACAAGAAAGCCGAAGCT-TCCTTCTGGACCGCCGAGGAGATTGATCTCTCCAAAGA 649499 Query 42368 CACGGCCGGCTGGGAGTCACTGTCTGAGA-ACGAAAAG---TTTTTCCTCAAAAACATAC 42423 | || |||| | || |||||| |||| || | |||| || | | | Sbjct 649500 TCTGCACGACTGGAACA-ACCGTCTGAATGACGATGAGCGTTATTTCATCTCTCATGTCC 649558 Query 42424 TGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGA 42483 | ||||||||||| ||||||||||| || || ||||||||| || | |||| | Sbjct 649559 TTGCCTTCTTCGCTGCCTCTGACGGAATCGTTAATGAGAACTTGTTGGAGCGCTTCAGCA 649618 Query 42484 AAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACG 42543 | ||||||||| |||||| || |||||||||||||||||||| || |||||| Sbjct 649619 ATGAGGTGCAGGTGCCTGAGGCTCGATGCTTCTACGGCTTCCAGATCATGATTGAGAACA 649678 Query 42544 TGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCC 42592 | || || ||| ||| || ||| | | || |||||| ||| || Sbjct 649679 TTCATTCGGAGACATACTCCCTGCTGATTGATACATACATCAAGGAGCC 649727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338893089760