Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20fumigatus_20[genbank_20GCA_5F001599 455.1_202016-03-01] 26 sequences; 28,388,732 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq3 143 3e-29 seq7 109 6e-19 seq1 96.9 4e-15 >seq3 Length=3005802 Score = 143 bits (158), Expect = 3e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 ||||| |||| ||| ||||| ||||| || || ||||| |||||||| | || ||| Sbjct 1935430 ACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAATCGGAAAGAGTGCGGCCATCCTCG 1935371 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||||||||| ||||| ||||||||||||||||| | || | | |||||| ||| Sbjct 1935370 AGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAGGAGGGATACCCTCCTTATCCTGA 1935311 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 |||||| ||||| | | | |||||||| || || || |||| |||||||| ||| Sbjct 1935310 ATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGACCTCCAAGGTGATGGTCTTG 1935251 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || || || || || || ||||| Sbjct 1935250 CCCGTGAGAGTCTTGACGAAAATCTGCAT 1935222 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| |||||| || | || ||||||||||| |||||||| ||||| || || | | | Sbjct 1936201 ACGCAGCACCAGGTGGAGCGTGCTCTCCTTTTGAATATTGTAATCGGAGAGGGTCCTCCC 1936142 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || | |||||| || ||||| || | ||||||||||| | || | || |||||| Sbjct 1936141 ATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTT 1936082 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 ||| |||||| |||| | ||| | | | ||||||| || ||||| |||| || | Sbjct 1936081 GTCTTGGATCTTGCTCTTCA-CGTTGTCAATCGTGTCGGAGGACTCCACCTCCAGGGTAA 1936023 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| || || || || || || || ||||| ||||| Sbjct 1936022 TGGTCTTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 1935986 Score = 98.7 bits (108), Expect = 1e-15 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| || || || |||||||| | ||||| | || || | ||||||||| ||||| Sbjct 1935720 TCCTTCTGAATGTTATAGTCGGACAAGGTGCGGCCATCCTCCAACTGCTTGCCAGCGAAA 1935661 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||| ||||||||||| | || | | |||||||||| ||||||| ||| | | Sbjct 1935660 ATCAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTAACGTTA 1935601 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | || ||||| |||||||| || | || ||||| ||||| || || || || || Sbjct 1935600 TCAATGGTATCGCTGGATTCCACCTCGAGAGTAATGGTCTTGCCAGTGAGGGTCTTGAC 1935542 Score = 93.3 bits (102), Expect = 5e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||||||||| ||| ||||||||||||||||| || || | || || | || || Sbjct 1935966 ACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAATCAGACAAGGTACGGCCATCTTCA 1935907 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 || ||||| || || || || | ||||| || || | || | | |||||| ||| | Sbjct 1935906 AGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCAGGAGGGATACCCTCCTTATCCTGG 1935847 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| |||||| | | | ||||| || || || || | ||||| || || Sbjct 1935846 ATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCTACTTCTAATGTGATAGTCTTT 1935787 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || || ||||| ||||||||||| Sbjct 1935786 CCCGTGAGAGTCTTAACGAAGATTTGCAT 1935758 >seq7 Length=1968185 Score = 109 bits (120), Expect = 6e-19 Identities = 135/182 (74%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| || || ||||||||| || ||||| | || || |||||||| || ||||| | Sbjct 1069538 CCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 1069479 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| |||||||||||| | || | | |||||||||| |||||| ||||| ||| | Sbjct 1069478 TCAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTG 1069420 Query 46524 CC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||||||| || || || | || ||||| || |||||||| || || || Sbjct 1069419 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 1069360 Query 46583 AA 46584 || Sbjct 1069359 AA 1069358 >seq1 Length=3959504 Score = 96.9 bits (106), Expect = 4e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||| || |||| || |||||| ||||| |||||||| || || || || | Sbjct 2216353 ACGGAGCACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGACC 2216412 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| |||||||||||||| ||||| |||| ||||||||||||| || | | |||||| Sbjct 2216413 GTCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGGGGGGATTCCCTCCTT 2216472 Query 46498 GTC 46500 ||| Sbjct 2216473 GTC 2216475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238216297520