Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20fumigatus_20[genbank_20GCA_5F001599 455.1_202016-03-01] 26 sequences; 28,388,732 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq3 123 2e-23 seq7 114 1e-20 seq1 107 2e-18 seq2 104 2e-17 >seq3 Length=3005802 Score = 123 bits (136), Expect = 2e-23 Identities = 169/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || || ||||| ||| | || || ||| || || Sbjct 1935986 ATGCAGATCTTCGTCAAGACTCTCACCGGAAAGACCATTACCCTGGAGGTGGAGTCCTCC 1936045 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | || |||| | |||| || |||| ||||| ||||| || || | |||| Sbjct 1936046 GACACGATTGACAACG--TGAAGAGCAAGATCCAAGACAAGGAGGGCATCCCTCCTGACC 1936103 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| || || ||| |||| || | | | |||||| ||| |||| Sbjct 1936104 AGCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGGAGGACCCTCTCCGATTACA 1936163 Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 | || |||||||| ||| ||||| || ||||||||||| || | || || Sbjct 1936164 ATATTCAAAAGGAGAGC-ACGCTCCACCTGGTGCTGCGTCTGCGTGGTGG 1936212 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||||||||| ||||||||| | || |||||| ||| | Sbjct 1935222 ATGCAGATTTTCGTCAAGACTCTCACGGGCAAGACCATCACCTTGGAGGTCGAGTCCAGC 1935281 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || || || | || || ||||| || || | ||||| Sbjct 1935282 GACACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCAG 1935341 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | |||| ||| ||||| ||||| || || | ||||| || ||| || ||| Sbjct 1935342 CAGCGCTTGATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTTTCCGATTATAAC 1935401 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| |||||| | || ||||| |||| || ||| Sbjct 1935402 ATCCAGAAGGAATCTACTCTGCACCTGGTTCTCCGT 1935437 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || |||||||| || || ||||| | || || ||| | | Sbjct 1935758 ATGCAAATCTTCGTTAAGACTCTCACGGGAAAGACTATCACATTAGAAGTAGAGTCTTCA 1935817 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | || | | |||| || |||| || || ||||| || || | || | Sbjct 1935818 GACACCATCGACAATG--TCAAGAGCAAGATCCAGGATAAGGAGGGTATCCCTCCTGATC 1935875 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| ||||| | || || || || || || || | || ||| | || |||| Sbjct 1935876 AACAGCGTCTCATCTTTGCTGGAAAGCAACTTGAAGATGGCCGTACCTTGTCTGATTACA 1935935 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 | |||||||||||| | || |||||| |||| || ||| || | || ||| Sbjct 1935936 ATATCCAAAAGGAATCCACACTGCATCTGGTCCTCCGTCTGCGTGGTGGC 1935985 >seq7 Length=1968185 Score = 114 bits (126), Expect = 1e-20 Identities = 136/182 (75%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || ||||| || ||||| ||| ||||||| ||| | | ||||| | | Sbjct 1069358 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCATC 1069417 Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371 | |||| | || | || |||| ||||| ||||| |||||| | ||||| ||||| || Sbjct 1069418 GACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCAGCAGCGCCT 1069476 Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431 || | ||| || || ||||| || || | |||||||| | |||||||||||| || || Sbjct 1069477 GATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATTCAGAA 1069536 Query 38432 GG 38433 || Sbjct 1069537 GG 1069538 >seq1 Length=3959504 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| |||||||| ||| ||||||| ||||| || || | ||| ||||| ||||| || Sbjct 2216475 GACAAGGAGGGAATCCCCCCCGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAG 2216416 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 |||| || |||||| |||||||||||||| ||||| |||| ||||| | ||||| Sbjct 2216415 GACGGTCGTACCCTCTCTGACTACAACATCCAGAAGGAGTCGACCCTGCACCTCGTGCTC 2216356 Query 38457 CGTTTGAGAGGCGG 38470 ||| || | || || Sbjct 2216355 CGTCTGCGTGGTGG 2216342 >seq2 Length=3755792 Score = 104 bits (114), Expect = 2e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 132894 GCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAA 132953 |||||||||||| |||| |||||||| | || ||||| |||||| |||||| | Sbjct 650041 GCAAGCAAAGTCTGTGTGCAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAG 649982 Query 132954 GCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAA 133013 || ||||| | ||| || || || ||||| || |||| || ||| || || || || Sbjct 649981 ACCAGGCATCAAGCCACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAAAA 649922 Query 133014 GACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGC 133073 || ||||| || || ||||| ||||| ||||||| |||| || | ||| || | Sbjct 649921 GATTCCCTCCACAGCGGCGAAGGCCACAAGGCGCTGAGCGAAAGTAGATTCCTTATCAGA 649862 Query 133074 GATCCAGCGCAGCGCCCATTCGGCCTT 133100 ||||| | || ||||| | |||||| Sbjct 649861 AATCCATCTCATGGCCCACTGGGCCTT 649835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172637443840