Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20fumigatus_20[genbank_20GCA_5F001599 455.1_202016-03-01] 26 sequences; 28,388,732 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq3 100 1e-15 seq6 96.9 1e-14 >seq3 Length=3005802 Score = 100 bits (110), Expect = 1e-15 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || |||||||| || || || || || ||||| || | || || || || || Sbjct 1935758 ATGCAAATCTTCGTTAAGACTCTCACGGGAAAGACTATCACATTAGAAGTAGAGTCTTCA 1935817 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | | || || || || |||||||| || || |||||||||||| Sbjct 1935818 GACACCATCGACAATGTCAAGAGCAAGATCCAGGATAAGGAGGGTATCCCTCCTGATCAA 1935877 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || | || || |||||||||||||| | || ||| | ||||| ||| Sbjct 1935878 CAGCGTCTCATCTTTGCTGGAAAGCAACTTGAAGATGGCCGTACCTTGTCTGATTACAAT 1935937 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 || | ||||| | ||||| || Sbjct 1935938 ATCCAAAAGGAATCCACACTGCA 1935960 >seq6 Length=2008369 Score = 96.9 bits (106), Expect = 1e-14 Identities = 194/287 (68%), Gaps = 12/287 (4%) Strand=Plus/Minus Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 || || || || || || ||||||||||| ||| ||||| || || || || || ||| Sbjct 1038520 GCTGTCATCACCGTACCAGCTTATTTCAACGATAATCAACGTCAGGCGACGAAGGACGCA 1038461 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441 || ||||| |||||||||||||| || || || ||||| || || || || ||| | Sbjct 1038460 GGTGCCATTGCCGGTTTAAATGTTCTCCGCATCATCAATGAGCCCACTGCCGCCGCTATC 1038401 Query 451442 GCATATGGACT------AGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTT 451495 || |||||||| |||||||| |||| |||| ||| | | | | | Sbjct 1038400 GCCTATGGACTCGGCTCCGGAAAATC---CGAAA---AAGAGCGTAATGTCCTGATCTAT 1038347 Query 451496 GATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAA 451555 ||| |||||||||| ||| ||| ||| | || || ||| || || || Sbjct 1038346 GATCTTGGTGGAGGTACTTTCGATGTGTCTCTTCTCAACATCCAAGGAGGTGTTTTCACT 1038287 Query 451556 GTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGA 451602 || ||||| || |||||||||||||| || || ||||| |||| Sbjct 1038286 GTCAAGGCCACAGCCGGTGATACTCATCTCGGTGGACAAGATTTTGA 1038240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975717741838808