Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20fumigatus_20[genbank_20GCA_5F001599 455.1_202016-03-01] 26 sequences; 28,388,732 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq3 170 4e-37 seq7 109 1e-18 >seq3 Length=3005802 Score = 170 bits (188), Expect = 4e-37 Identities = 163/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || ||| ||| ||||||||||||||||||| || || ||||||||||| Sbjct 1936194 ACCAGGTGGAGCGTGCTCTCCTTTTGAATATTGTAATCGGAGAGGGTCCTCCCATCTTCC 1936135 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | ||||||||| |||||||| || || || ||||| ||||| ||||| || |||||||| Sbjct 1936134 AACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCTTGG 1936075 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||| ||||| ||||| || ||||| || ||||||| |||||| Sbjct 1936074 ATCTTGCTCTTCACGTTGTCAATCGTGTCGGAGGACTCCACCTCCAGGGTAATGGTCTTT 1936015 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||| || ||||| | ||||| Sbjct 1936014 CCGGTGAGAGTCTTGACGAAGATCTGCAT 1935986 Score = 123 bits (136), Expect = 6e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATC-GGCAAGAGTTCTCCCATCTTC 194990 || || || || ||||| || ||||| ||||||||||| | |||| || | |||||||| Sbjct 1935966 ACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAATCAGACAAG-GTACGGCCATCTTC 1935908 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 || ||||| || || ||||| || || ||||| || ||||| || || || || || || Sbjct 1935907 AAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCAGGAGGGATACCCTCCTTATCCTG 1935848 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || |||||| || || |||||||| ||| || ||||| | || | ||||| Sbjct 1935847 GATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCTACTTCTAATGTGATAGTCTT 1935788 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| || | ||| || ||||| | |||||| Sbjct 1935787 TCCCGTGAGAGTCTTAACGAAGATTTGCAT 1935758 Score = 116 bits (128), Expect = 8e-21 Identities = 154/212 (73%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| ||||| ||||| || || || || || || ||||||| |||||| | ||||| || Sbjct 1935431 AACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAATCGGAAAGAGTGCGGCCATCCTC 1935372 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || ||||| || | || || ||||| ||||| || || || || || || Sbjct 1935371 GAGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAGGAGGGATACCCTCCTTATCCTG 1935312 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTC 195108 ||| || |||||| || ||||| |||| | | || || || || | ||| | ||| Sbjct 1935311 AATCTTCGACTTGACATTGTCAATAGTGTCGCTGGAC--TCGACCTCCAAGGTGATGGTC 1935254 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || | ||| || ||||| | ||||| Sbjct 1935253 TTGCCCGTGAGAGTCTTGACGAAAATCTGCAT 1935222 Score = 104 bits (114), Expect = 5e-17 Identities = 111/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 160574 AGAGCCAGAGAGATTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAA 160633 |||||| | || | ||||||||| | ||||| | ||||| ||||||||| |||| | Sbjct 954105 AGAGCCCGTGATCTGTTCTACGCCCTGTGGACCCCTGATCTGTTCATGAAGCGAGTTGAG 954046 Query 160634 GACAATGGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTAT 160693 ||| || || |||| || ||||| ||||||||||| ||||| | | ||||||||| Sbjct 954045 TCCAACGGTGACTGGACTCTGTTCTGCCCCAATGAAGCCCCTGGTTTGGCAGATGTTTAT 953986 Query 160694 GGTTCCGAGTTCGAGACTCTTTATGAA 160720 ||| ||||| || ||||||||||| Sbjct 953985 GGTGATGAGTTTGATGCTCTTTATGAA 953959 >seq7 Length=1968185 Score = 109 bits (120), Expect = 1e-18 Identities = 134/182 (74%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || ||||| ||||| ||| || || | ||||| || ||||||||||| |||||||| Sbjct 1069536 TTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 1069477 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 || || || ||||| || ||||| || || ||||| || || || ||||||||| || Sbjct 1069476 AGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 1069417 Query 195073 ATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129 |||||||| ||| || || || ||||||| ||||| || |||| || || ||| Sbjct 1069416 ATGGTGTCGCTCGA---CTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 1069360 Query 195130 AA 195131 || Sbjct 1069359 AA 1069358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481230403942