Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20fumigatus_20[genbank_20GCA_5F001599 455.1_202016-03-01] 26 sequences; 28,388,732 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq2 159 6e-34 >seq2 Length=3755792 Score = 159 bits (176), Expect = 6e-34 Identities = 350/521 (67%), Gaps = 19/521 (4%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | |||||||||||||| ||||| || | | |||||| | || Sbjct 650329 CTGGTAGTCACCAACACGCTTCTCAAAGAAGTTCGTCTTTCCTGCAAGCGAGATACTTTC 650270 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGT---CAGGCCCATCTGTTCC 47953 ||||||| |||||||||||| | ||| | | | ||| || | || | | Sbjct 650269 CATGAAGTCGAAGGGGTTGGGAGAGTTGAAGTACTTCTTGTTTCCAAGAGCAAC-----C 650215 Query 47954 AGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013 | ||| |||| || ||| |||| || || | |||| || | ||||||||| | | Sbjct 650214 AACAGCCGATCAGCAACGAACTCAATATACTGGCACATTAGCTTAGAGTTCATGCCCAGG 650155 Query 48014 AGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073 || | || || | ||| | ||| | ||||||| || || ||| || || | | | Sbjct 650154 AGAGCAACAGGAAGAGCGTCTGTCAAGAACTCCTGTTCAATGGCCACAGCCTCAACGATA 650095 Query 48074 ATCTGCT---TAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATG 48130 || | || |||| || | | | | ||| || ||| | | |||| | | Sbjct 650094 ATATCCTCAATAACCTTCTTGTCGGGGCGATGGTT---CAAGTGA---GAAAAGAGAAGG 650041 Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 || |||||||| |||||| || ||||| || ||||||| |||||||||| |||| Sbjct 650040 CAAGCAAAGTCTGTGTGCAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGA 649981 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 |||||||| | || | || || |||||||| || | || ||||| |||||||| ||| Sbjct 649980 CCAGGCATCAAGCCACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAAAAG 649921 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 || |||||||| || ||||| || || | || |||||| || | ||| || || Sbjct 649920 ATTCCCTCCACAGCGGCGAAGGCCACAAGGCGCTGAGCGAAAGTAGATTCCTTATCAGAA 649861 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 ||||| | ||||| | ||||||||| |||| || || Sbjct 649860 ATCCATCTCATGGCCCACTGGGCCTTCTTCCTGATACAAGG 649820 Score = 111 bits (122), Expect = 3e-19 Identities = 175/250 (70%), Gaps = 3/250 (1%) Strand=Plus/Minus Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 |||| || || | ||||| || ||||||||| ||||||||| | |||||| || Sbjct 649690 TCTCCGAATGAATGTTCTCAATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCAGGCA 649631 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 ||||||| || || ||| | ||||| || |||||||| || || || || || |||| Sbjct 649630 CCTGCACCTCATTGCTGAAGCGCTCCAACAAGTTCTCATTAACGATTCCGTCAGAGGCAG 649571 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGA---GCATTCC 48605 | ||||||||||||||||| | ||||| ||||| | || | ||| |||| Sbjct 649570 CGAAGAAGGCAAGGACATGAGAGATGAAATAACGCTCATCGTCATTCAGACGGTTGTTCC 649511 Query 48606 AGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTT 48665 || | || | |||||| || || | || || | ||||||||||| || |||| Sbjct 649510 AGTCGTGCAGATCTTTGGAGAGATCAATCTCCTCGGCGGTCCAGAAGGAAGCTTCGGCTT 649451 Query 48666 TTTTGTACAT 48675 | |||||||| Sbjct 649450 TCTTGTACAT 649441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532497251840