Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20fumigatus_20[genbank_20GCA_5F001599 455.1_202016-03-01] 26 sequences; 28,388,732 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq5 113 1e-19 seq13 91.5 4e-13 >seq5 Length=2594130 Score = 113 bits (124), Expect = 1e-19 Identities = 130/174 (75%), Gaps = 11/174 (6%) Strand=Plus/Minus Query 301783 GATGGATTCTTTGTGTTTTCCGATAGAGAC----AGAATTTCTTCAATACGGGGAACACC 301838 ||||| ||||| |||| | ||| ||| |||||||| | | ||| |||||||| Sbjct 1706127 GATGGCGTCTTTATGTT----GGTAGCGACGTTAAGAATTTCCTTGAGACGAGGAACACC 1706072 Query 301839 ACGGGTTACGTTAGACTTGGACGCAACACCAGCAAAGTGGAAAGTATTCAGAGTTAATTG 301898 |||| ||||| ||| |||| ||||||||||||||||||||||||| || | || Sbjct 1706071 GAGGGTGACGTT---CTTCGACGAGACACCAGCAAAGTGGAAAGTATTCAAGGTCATCTG 1706015 Query 301899 AGTAGTTGGCTCACCAATACTTTGTGCCGCAATCATACCAACCATTTCTCCTGG 301952 |||| |||||||||||| || || || | || |||||||||||| ||||| Sbjct 1706014 TGTAGCGGGCTCACCAATAGACTGAGCGGCTAGCACACCAACCATTTCACCTGG 1705961 >seq13 Length=783744 Score = 91.5 bits (100), Expect = 4e-13 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 |||||||| | ||||||||||||||| ||||| || |||||||| |||||||| || || Sbjct 253815 GCACCGTGCGCAATCATACAATCACGTTCCATCTCTCCGAAACGCAGACCACCGTCACGG 253874 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGA 251574 || ||||| || ||||||| || || ||| Sbjct 253875 GCTCTACCTTCCACAGGCTGCCGGGTCAGA 253904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817109700762