Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20fumigatus_20[genbank_20GCA_5F001599 455.1_202016-03-01] 26 sequences; 28,388,732 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq3 122 8e-23 >seq3 Length=3005802 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || ||||| || || || || || || Sbjct 1935986 ATGCAGATCTTCGTCAAGACTCTCACCGGAAAGACCATTACCCTGGAGGTGGAGTCCTCC 1936045 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| || || || ||||| || || Sbjct 1936046 GACACGATTGACAACGTGAAGAGCAAGATCCAAGACAAGGAGGGCATCCCTCCTGACCAG 1936105 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || ||| |||| ||| ||| | | | || ||||| || Sbjct 1936106 CAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGGAGGACCCTCTCCGATTACAAT 1936165 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||||| || || ||| ||||| |||| |||| || || Sbjct 1936166 ATTCAAAAGGAGAGCACGCTCCACCTGGTGCTGCGTCTGCGTGGTGG 1936212 Score = 111 bits (122), Expect = 1e-19 Identities = 551/862 (64%), Gaps = 28/862 (3%) Strand=Plus/Plus Query 138156 ATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCCCGT 138215 ||| |||||||||| |||| | | | ||| | | || | ||| || |||||||| || Sbjct 952759 ATCAACAGTAAACTGGATGGGAGCGGAGGCAGCCATGGTACGCAGGTAGTACATTCCAGT 952818 Query 138216 TTTTAA-CCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAG-TAACGCGTAAGTCGGT 138273 || || |||||||||| | | | ||| || ||||| | | | || || || Sbjct 952819 CTTCAAACCCATTTTCCACCCAGCAAA-GTGCATACTGGTGAGCTTGCCCATA-GTAGGC 952876 Query 138274 TTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGCC 138333 | | ||| ||||| | |||||| ||| || |||||||| || || || |||| Sbjct 952877 TCCTTCAGGTGAATGTTGAGAGATTGAGACTGGTCAATGAAAGCACCACGGTCGGCGGCC 952936 Query 138334 ATGTTAATTAAATTTTTACTTTTC---ATCTCCCACACGGTCTTGTATAGATCACGAATA 138390 || | | | | ||| || || ||||||||||||||||| ||| | || Sbjct 952937 ATCTGCAGGA---TGGTACGTTGGGAGATTTCCCACACGGTCTTGTAGAGAGCCTTGAT- 952992 Query 138391 TGTCG-CGGTATTGTTGC-AATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTC 138448 |||| ||| | ||||| ||| ||||||| | || | || ||||| || ||| Sbjct 952993 -GTCGGCGGGAATGTTGGGAATGTTTTGAACGGAGCCACCATCTGCGATGATACGGTTTT 953051 Query 138449 TCATGTCATCGTTGTACAGATTCAACTTGATCAAG-TCGTTTATCAGATATCTGTTTATG 138507 |||||| || ||||| | | || |||| || || | || | ||| | | Sbjct 953052 TCATGTTGTCCGACCACAGACCAAGGTCGA-CAAGATCCTTGAGAAGCCAAGGGTTAACG 953110 Query 138508 ACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAAC 138567 ||||| || ||||| || | || || ||| ||| ||||| |||| |||||||||| Sbjct 953111 ACCTGGAACTCACCAGCAAGAACACGGCGAGAGTAGATGTTCGAGGTGTAAGGCTCAAAA 953170 Query 138568 GATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGA 138627 |||||||| ||||||||||| ||| | ||||| ||||| |||||||| | | Sbjct 953171 CATTCGTTGAAGCCCAGAATCTGGCTGGTGCTTGCGGTGGGCATCGGTGCCACCAACAAA 953230 Query 138628 GAATTCCGTAAACCGTG--AAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAAT 138685 || || | |||||| || |||| |||| || || ||||||||| | | Sbjct 953231 CTGTTACGAACACCGTGCTGGGCAATCTTCG--CCTTCAGAGAATCCCAGTCCCAGAGGT 953288 Query 138686 CGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTT 138745 | | || || ||| ||||||||| ||||| | || ||| | |||| ||| | Sbjct 953289 CCGTGGGGGTTCTGTCCCACATATCATACTGGAGAATACCCTGAGAGACGGGGGAGCCCT 953348 Query 138746 CGTACGAATCGTATACACCAAACTCTTGCGCCAACTC----GTTGCTCGCCTCGAGCGCA 138801 |||| | || || ||||||||| | |||| ||| | ||| | | ||| Sbjct 953349 CGTAAGTTTCATAAGGACCAAACTCCTTGGCCAGCTCACAAGATGCAGTC----AAAGCA 953404 Query 138802 CCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTAC 138861 || | || || || || ||||| || ||| || || |||||| ||| || Sbjct 953405 CCGTGATAGATGGTCTCAAAGATCTGGATGTTTAGCTGTCTTGCTTCGGCGGAGTCGAAC 953464 Query 138862 GGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGA 138921 |||| ||| || ||| || ||||||| || | || || | | | |||||| Sbjct 953465 GGCAGGCGCAGGGCAAGGAAGGCATCGGCCAAACCATTGACACCAAGAGCAATGGGGCGA 953524 Query 138922 TGGCGCAGATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTG 138981 || |||| || | || || || | ||| || ||||||||||| || || ||| Sbjct 953525 TGCCGCATGTTGCTCTTCTTGGCCTCTGGAACAGGGTAGTAGTTTACATCAATAATCTTG 953584 Query 138982 TTTAAATTTCGCACGACCACCT 139003 || || || || || | |||| Sbjct 953585 TTCAAGTTACGAACCAAGACCT 953606 Score = 111 bits (122), Expect = 1e-19 Identities = 140/190 (74%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGA-AAC 24777 || || || || || || || ||||| ||||| || ||| ||| ||| || | || ||| Sbjct 1935545 AAGACCCTCACTGGCAAGACCATTACTCTCGAGGTGGAATCCAGCGATACCATTGATAAC 1935604 Query 24778 GGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTT 24837 | ||| | || |||||| ||||| || || || ||||| || || || ||| |||| || Sbjct 1935605 GTTAAGTCGAA-GATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTGATTTT 1935663 Query 24838 TGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATC 24897 || || || ||| |||||||| | | | |||| || ||||||||||| |||||||| Sbjct 1935664 CGCTGGCAAGCAGTTGGAGGATGGCCGCACCTTGTCCGACTATAACATTCAGAAGGAATC 1935723 Query 24898 GACACTACAC 24907 ||| || ||| Sbjct 1935724 GACTCTCCAC 1935733 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| |||| || || || || || ||||| || | |||||||| | | Sbjct 1935758 ATGCAAATCTTCGTTAAGACTCTCACGGGAAAGACTATCACATTAGAAGTAGAGTCTTCA 1935817 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| || || || || || ||||| |||||| Sbjct 1935818 GACACCATCGACAATGTCAAGAGCAAGATCCAGGATAAGGAGGGTATCCCTCCTGATCAA 1935877 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | |||||||| || || || || || ||| | | | |||| ||||| || Sbjct 1935878 CAGCGTCTCATCTTTGCTGGAAAGCAACTTGAAGATGGCCGTACCTTGTCTGATTACAAT 1935937 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || ||||||||||| ||||| || |||| | || |||| || ||| Sbjct 1935938 ATCCAAAAGGAATCCACACTGCATCTGGTCCTCCGTCTGCGTGGTGGC 1935985 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || |||||||| || | || || || || || || || || || | || || || || Sbjct 1935219 ACCATGCAGATTTTCGTCAAGACTCTCACGGGCAAGACCATCACCTTGGAGGTCGAGTCC 1935278 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | |||||| | || | || || ||||| || || || || || || ||||| || Sbjct 1935279 AGCGACACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGTATCCCTCCTGAC 1935338 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || || ||||| || || || || ||||| |||||| | | | || |||||| Sbjct 1935339 CAGCAGCGCTTGATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTTTCCGATTAT 1935398 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| || |||||||| || || ||| |||| Sbjct 1935399 AACATCCAGAAGGAATCTACTCTGCACCTGGT 1935430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897453783280