Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20fumigatus_20[genbank_20GCA_5F001599 455.1_202016-03-01] 26 sequences; 28,388,732 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq3 100 5e-15 seq2 100 5e-15 >seq3 Length=3005802 Score = 100 bits (110), Expect = 5e-15 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||||||||| | || |||| ||| || ||||| |||||||| |||| ||||| || Sbjct 954211 CTGGTCGACATACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGA 954270 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 || || ||||| | | ||||| ||| | ||| || | ||| || || ||| Sbjct 954271 GGACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGGCC 954330 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 ||| ||||| || | ||| ||||| | || || | || || || |||||||| ||||| Sbjct 954331 GATACCGCCAGCTGTCTTCGAGATCATGGCACAAGTCTTAAGGGTGTCGTAGATACCCTC 954390 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACG 2073757 || || ||||||| || | || ||||| |||| Sbjct 954391 AATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACG 954428 Score = 87.8 bits (96), Expect = 3e-11 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 2071819 GGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTC 2071878 ||||| || || | |||||| ||| | | | || || ||| ||||| || ||| Sbjct 954017 GGGCAGAACAGAGTCCAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTC 954076 Query 2071879 CACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGG 2071938 |||||| |||| || ||||| || || | | |||||||| ||||||||||| || Sbjct 954077 CACAGGGCGTAGAACAGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGA 954136 Query 2071939 TCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTG 2071998 || || | |||| || ||||| ||||| ||||| ||||| ||||| ||||| | Sbjct 954137 TCCAGGAACTCGAAGATATCGGCATGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAGGG 954196 Query 2071999 CGCTTG 2072004 |||||| Sbjct 954197 CGCTTG 954202 >seq2 Length=3755792 Score = 100 bits (110), Expect = 5e-15 Identities = 91/115 (79%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || |||||||| ||||| ||||| | ||| | ||| | || |||||||| || || ||| Sbjct 2410332 GCTGCCAACTATCTCGATATCAAAGCTCTCTTGGATGTCGGCTGCAAGACTGTTGCGAAC 2410273 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | |||||||||||||| ||||| || || ||||||||||| ||||| || ||| Sbjct 2410272 ATGATCAAGGGCAAGTCCCCCGAAGAGATTCGCAAGACCTTCAACATTCAGAACG 2410218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916243634261414