Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20fumigatus_20[genbank_20GCA_5F001599 455.1_202016-03-01] 26 sequences; 28,388,732 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq3 132 5e-26 seq2 118 1e-21 seq7 104 2e-17 seq1 86.0 6e-12 >seq3 Length=3005802 Score = 132 bits (146), Expect = 5e-26 Identities = 151/200 (76%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| || || |||||| | ||| | | | ||||||||||||||||| Sbjct 1935418 GTAGATTCCTTCTGGATGTTATAATCGGAAAGAGTGCGGCCA-TCCTCGAGCTGCTTGCC 1935360 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| | ||||||||||| |||||||| || ||||| || ||||| ||| Sbjct 1935359 AGCGAAAATCAAGCGCTGCTGGTCAGGAGGGATACCCTCCTTATCCTGAATCTTCGACTT 1935300 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| |||||| ||| ||| || || | ||||| ||| ||||| || ||||| Sbjct 1935299 GACATTGTCAATAGTGTCGCTGGACTCGACCTCCAAGGTGATGGTCTTGCCCGTGAGAGT 1935240 Query 133643 TTTTACGAAAATCTGCATGG 133662 || |||||||||||||||| Sbjct 1935239 CTTGACGAAAATCTGCATGG 1935220 Score = 127 bits (140), Expect = 2e-24 Identities = 144/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCCGCGTA 133528 ||| || || |||||||||||| | || | || || | |||||| || ||| | Sbjct 1936177 CTCCTTTTGAATATTGTAATCGGAGAGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAA 1936118 Query 133529 AATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTG 133588 ||||| ||||||||||| ||||||||||| |||||||| |||||| ||| | | Sbjct 1936117 GATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCTTGGATCTTGCTCTTCACGTT 1936058 Query 133589 CTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTAC 133648 |||| |||||||| || |||||| || | ||| | ||| || ||||| ||||| || || Sbjct 1936057 GTCAATCGTGTCGGAGGACTCCACCTCCAGGGTAATGGTCTTTCCGGTGAGAGTCTTGAC 1935998 Query 133649 GAAAATCTGCATG 133661 ||| ||||||||| Sbjct 1935997 GAAGATCTGCATG 1935985 Score = 98.7 bits (108), Expect = 1e-15 Identities = 136/188 (72%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| || || || ||| || ||| | | | ||||| | ||||||||| Sbjct 1935726 GTCGATTCCTTCTGAATGTTATAGTCGGACAAGGTGCGGCCA-TCCTCCAACTGCTTGCC 1935668 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| || ||||||||||| |||||||| || |||||||| |||||| ||| Sbjct 1935667 AGCGAAAATCAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTT 1935608 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| || ||| ||| ||||| |||| || | ||| ||||| || || || Sbjct 1935607 AACGTTATCAATGGTATCGCTGGATTCCACCTCGAGAGTAATGGTCTTGCCAGTGAGGGT 1935548 Query 133643 TTTTACGA 133650 || |||| Sbjct 1935547 CTTGACGA 1935540 >seq2 Length=3755792 Score = 118 bits (130), Expect = 1e-21 Identities = 333/510 (65%), Gaps = 21/510 (4%) Strand=Plus/Minus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || || || || |||||||| ||||| || || || | | ||| || | | Sbjct 650329 CTGGTAGTCACCAACACGCTTCTCAAAGAAGTTCGTCTTTCCTGCAAGCGAGATACTTTC 650270 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| |||||| | ||| ||||| ||| | || | || | ||| Sbjct 650269 CATGAAGTCGAAGGGGTTGGGAGAGTTGAAGTACTTCTTGTTTCCAAGAGCAACCAACAG 650210 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 || || || || |||||||| |||| |||||| || | |||||||||||| | || Sbjct 650209 CCGATCAGCAACGAACTCAATATACTGGCACATTAGCTTAGAGTTCATGCCCAGGAGAGC 650150 Query 120531 CACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGC 120590 || || | || || || ||||||| |||||| |||| ||||| || || | Sbjct 650149 AACAGGAAGAGCGTCTGTCAAGAACTCCTGTTCAATGGCCACAGCCTCAACGATAATATC 650090 Query 120591 GAGCATAGTGTGGCCGGGCATCTTGT--GTTCGATGCGCGTTCG-GT------AGTACAG 120641 ||| | |||||| | ||||| |||| || || || Sbjct 650089 CTCAATAACCT---------TCTTGTCGGGGCGATG---GTTCAAGTGAGAAAAGAGAAG 650042 Query 120642 GCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAG 120701 ||| |||||||| |||||||| |||||||| || || || ||||||||| || || || Sbjct 650041 GCAAGCAAAGTCTGTGTGCAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAG 649982 Query 120702 GCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAA 120761 || ||||| | ||| | |||| | |||| |||| ||||| || || || || Sbjct 649981 ACCAGGCATCAAGCCACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAAAA 649922 Query 120762 CACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTC 120821 | |||||||| ||| ||||| || | ||||| || || || | ||| Sbjct 649921 GATTCCCTCCACAGCGGCGAAGGCCACAAGGCGCTGAGCGAAAGTAGATTCCTTATCAGA 649862 Query 120822 GATCCACTTCATGGCCCACTCGGCCTTTTT 120851 ||||| |||||||||||| |||||| || Sbjct 649861 AATCCATCTCATGGCCCACTGGGCCTTCTT 649832 >seq7 Length=1968185 Score = 104 bits (114), Expect = 2e-17 Identities = 133/181 (73%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531 ||||| || ||||| |||| || ||| | | | ||||| |||||||| || ||| | || Sbjct 1069536 TTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCAAGCTGCTTACCAGCGAAGAT 1069478 Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591 || ||||||||||| || || || || |||||||| |||||| ||||| | || Sbjct 1069477 CAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTC 1069418 Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651 | |||||| | | ||| ||||||| ||| | ||| || || ||||| || || ||||| Sbjct 1069417 GATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 1069358 Query 133652 A 133652 | Sbjct 1069357 A 1069357 >seq1 Length=3959504 Score = 86.0 bits (94), Expect = 6e-12 Identities = 86/110 (78%), Gaps = 4/110 (4%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTG 133520 ||| ||||| ||||| || ||||| || | || |||| |||||||||||||||| Sbjct 2216371 GGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGGGT--ACGACCGTCCTCGAGCTGCTTG 2216428 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGT 133570 || ||| | || || |||||||||||||| ||||| || |||||||| || Sbjct 2216429 CCAGCGAAGATCAGACGCTGCTGGTCGGGGGGGATTCCCTCCTTGTCTGT 2216478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420642888240