Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20fumigatus_20[genbank_20GCA_5F001599 455.1_202016-03-01] 26 sequences; 28,388,732 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq3 116 5e-20 >seq3 Length=3005802 Score = 116 bits (128), Expect = 5e-20 Identities = 208/301 (69%), Gaps = 2/301 (1%) Strand=Plus/Minus Query 259883 ACCTACGAGGCCATGTCGCAGCAGTTGTTCACCTCA-GCGACGCCCACGCTCTTTAATGC 259941 |||||| | |||||| ||| | | ||||| ||| || | || || || || ||||| Sbjct 954510 ACCTACCACCTCATGTCTCAGAAATACTTCAC-TCATGCTTCTCCTACTCTGTTCAATGC 954452 Query 259942 CGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGAT 260001 || || || | || ||| | |||| ||||| || | || ||||||| ||| || Sbjct 954451 TGGTACTCCCCAACCCCAGCTTGCGTCTTGCTTCCTCGTCGATATGAAGGAGGATAGCAT 954392 Query 260002 CGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCAT 260061 ||||| ||||| ||||| || ||| || || | ||||| ||| | || ||||| || Sbjct 954391 TGAGGGTATCTACGACACCCTTAAGACTTGTGCCATGATCTCGAAGACAGCTGGCGGTAT 954332 Query 260062 CGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCA 260121 ||| || || ||| | || ||| | ||| ||||| | | ||||| || || Sbjct 954331 CGGCCTTAACGTTCACCGCATCCGTGCCACAGGCTCCTACATTGGTGGCACTAATGGGTC 954272 Query 260122 GTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCA 260181 || ||||| |||| |||||||||||||| || ||| |||| || | || |||||||| Sbjct 954271 CTCTAACGGTATTGTTCCCATGCTTCGCGTGTTCAACAACACTGCTAGGTATGTCGACCA 954212 Query 260182 G 260182 | Sbjct 954211 G 954211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177808692252212