Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20fumigatus_20[genbank_20GCA_5F001599 455.1_202016-03-01] 26 sequences; 28,388,732 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq3 176 6e-39 seq2 104 3e-17 >seq3 Length=3005802 Score = 176 bits (194), Expect = 6e-39 Identities = 473/722 (66%), Gaps = 6/722 (1%) Strand=Plus/Plus Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576 || || ||||| || ||||||| |||| ||||| |||||| || || | || | | Sbjct 953972 TCAAACTCATCACCATAAACATCTGCCAAACCAGGGGCTTCATTGGGGCAGAACAGAGTC 954031 Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAG 69636 || || | | || |||||| ||||| || ||||| || |||| || || || Sbjct 954032 CAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGGGCGTAGAAC 954091 Query 69637 AGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATA 69696 ||||| | || ||| ||| || || || || || |||||| || ||||| | Sbjct 954092 AGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAGGAACTCGAAG 954151 Query 69697 ATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCC 69756 ||||| | |||||| || || || || || || | | || || || || || |||||| Sbjct 954152 ATATCGGCATGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTGTTACCTCCC 954211 Query 69757 TGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGAT 69816 || || | || || |||||||| || | || | ||||| |||| |||||| ||||| Sbjct 954212 TGGTCGACATACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAG 954271 Query 69817 TTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCT 69876 ||||| || ||| ||| || ||| | || || || || || || Sbjct 954272 GACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGGCCG 954331 Query 69877 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCT 69936 || || || || | || ||||| | |||||| || | ||||| || |||||||| Sbjct 954332 ATACCGCCAGCTGTCTTCGAGATCATGGCACAAGTCTTAAGGGTGTCGTAGATACCCTCA 954391 Query 69937 ATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGAC---ATTTGATGATGTATAGTT 69993 |||||||| || |||| | | || || || |||| | || | || ||| Sbjct 954392 ATGCTATCCTCCTTCATATCGACGAGGAAGCA---AGACGCAAGCTGGGGTTGGGGAGTA 954448 Query 69994 CCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTAT 70053 || ||||| || | |||||||| || |||||||| |||| | ||| | || | ||| Sbjct 954449 CCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTAG 954508 Query 70054 GTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATA 70113 || ||||| || ||| |||| |||||| || | ||| ||||||||||||| Sbjct 954509 GTCTCAATGGCCTTTTCAATATTGTTGCCATGAATGCCAACCGCAACACGCATCAACAAG 954568 Query 70114 TGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTT 70173 ||||| || || || | || ||| ||| || |||||| || || || || Sbjct 954569 TGCTGCGGACGCTCAGCAACCTTGCCATTGATTCGCAGCAGGTAGGACCGCTCGAGTGTC 954628 Query 70174 TTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTA 70233 || || || ||| ||||||| ||||| | || || | |||| |||| || || | | Sbjct 954629 TTGAAACCGAAAAAGTTGTAGTTGAAGTCACGATCATATACAATAGCAGAGTTGAGCTCA 954688 Query 70234 TC 70235 || Sbjct 954689 TC 954690 >seq2 Length=3755792 Score = 104 bits (114), Expect = 3e-17 Identities = 335/515 (65%), Gaps = 9/515 (2%) Strand=Plus/Minus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 || ||||| |||||||| || ||||| || || || || || ||| | | || ||| || Sbjct 650331 TTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTCGTCTTTCCTGCAAGCGAGATACTT 650272 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 |||||||| || || || || | | || | | || || ||| | | | | Sbjct 650271 TCCATGAAGTCGAAGGGGTTGGGAGAGTTGAAGTACTTCTTGTTTCCAAGAGCAACCAAC 650212 Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505 | | ||| ||||| || || || || ||| | | | | ||||| || | ||| Sbjct 650211 AGCCGATCAGCAACGAACTCAATATACTGGCACATTAGCTTAGAGTTCATGCCCAGGAGA 650152 Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCT--GTTATTA 39563 ||| || ||||| || || | ||||| | ||| ||| | || ||||| | || || Sbjct 650151 GCAACAGGAAGAGCGTCTGTCAAGAACTCCTGTTCAATGGCCACAGCCTCAACGATAATA 650092 Query 39564 TCGATGTTACTACCTCATCACTCGGTG-GATGCAATAAATGTTTAAACATTAAGCAGGCG 39622 || || |||| | |||| | |||| || || ||| | | ||| || Sbjct 650091 TCCTCAATA--ACCTTCTTG-TCGGGGCGATGGTTCAAGTGAGAAAAGAGAAGGCAAGCA 650035 Query 39623 AAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGC 39682 ||||| || || ||||| || | | || | ||||| || || ||||| |||||| Sbjct 650034 AAGTCTGTGTGCAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCAGGC 649975 Query 39683 ATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCT 39742 || | |||||||| || ||||| || |||| ||||||||||||||| || ||||| || Sbjct 649974 ATCAAGCCACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAAAAGATTCCC 649915 Query 39743 TCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTAT---GTATCCAC 39799 || || || || || || ||||| | || || || | | || |||| ||||| Sbjct 649914 TCCACAGCGGCGAAGGCCACAAGGCGCTGAGCGAAAGTAGATTCCTTATCAGAAATCCAT 649855 Query 39800 TTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGG 39834 || ||||| | || |||||| | | |||||| Sbjct 649854 CTCATGGCCCACTGGGCCTTCTTCCTGATACAAGG 649820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908576754640