Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20fumigatus_20[genbank_20GCA_5F001599 455.1_202016-03-01] 26 sequences; 28,388,732 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq3 118 9e-22 seq7 84.2 2e-11 >seq3 Length=3005802 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| || |||| || | |||| ||| | || || || ||||| |||||||| || Sbjct 1935986 TGCCACCACGCAGACGGAGGACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAATCAG 1935927 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 || | | || | ||||| || || || || || | ||||||||||||||||| || | Sbjct 1935926 ACAAGGTACGGCCATCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCAGGAG 1935867 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | |||||| ||||| ||||||| | || | | || | ||||||| | || | Sbjct 1935866 GGATACCCTCCTTATCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCTA 1935807 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 |||||| || |||| || ||||| ||||| || || |||||||||||| Sbjct 1935806 CTTCTAATGTGATAGTCTTTCCCGTGAGAGTCTTAACGAAGATTTGCATA 1935757 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| |||| |||| || | ||| || |||||||||||||| ||| Sbjct 1936212 CCACCACGCAGACGCAGCACCAGGTGGAGCGTGCTCTCCTTTTGAATATTGTAATCGGAG 1936153 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | | | | ||||| | ||| ||||| ||| | ||||||||||| || || || || Sbjct 1936152 AGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGG 1936093 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || ||||||| | |||| | | || | ||||| | || || || Sbjct 1936092 ATGCCCTCCTTGTCTTGGATCTTGCTCTTCACGTTGTCAATCGTGTCGGAGGACTCCACC 1936033 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | || || || ||||| || || ||||| ||||| Sbjct 1936032 TCCAGGGTAATGGTCTTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 1935986 >seq7 Length=1968185 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 27060 TTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATG 27119 || ||||| ||||||||||||| | |||| | || || ||||| ||||| ||| | || Sbjct 1069536 TTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 1069477 Query 27120 AGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCT 27179 || ||||| || || || || | |||||| || || ||||||| || | | | || Sbjct 1069476 AGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 1069417 Query 27180 ACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAA 27238 | ||||| | | ||||| || || || || | || |||||||| || || || || Sbjct 1069416 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 1069358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934265348912