Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20fumigatus_20[genbank_20GCA_5F001599 455.1_202016-03-01] 26 sequences; 28,388,732 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq2 118 1e-21 seq3 100 3e-16 seq8 89.7 6e-13 >seq2 Length=3755792 Score = 118 bits (130), Expect = 1e-21 Identities = 164/226 (73%), Gaps = 8/226 (4%) Strand=Plus/Plus Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGTC 94790 |||||| ||||| ||||| || | ||||| |||| ||| || |||| | || Sbjct 649816 AGTTCCTTGTATCAGGAAGAAGGCCCAGTGGGCCATGAGATGGATTTCTGATAAGGAATC 649875 Query 94791 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 94850 | | || ||| |||| || | || || || ||| ||||| ||||| |||||||| Sbjct 649876 ---TACTTTCGCTCAGCGCCTTGTGGCCTTCGCCGCTGTGGAGGGAATCTTTTTCTCTGG 649932 Query 94851 TTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909 || || ||| | || | ||||| |||||||| || | ||||| |||||| |||| Sbjct 649933 ATCTTT-TGCTTCCATCTTCTGGCTGAAGAAGCGTGGCTTGATGCCTGGTCTCACTTTCT 649991 Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||||||||| |||||||||||||||||||| ||| ||| ||||| Sbjct 649992 CCAACGAGCTCATCTCTCGTGACGAGGGACTGCACACAGACTTTGC 650037 >seq3 Length=3005802 Score = 100 bits (110), Expect = 3e-16 Identities = 457/714 (64%), Gaps = 8/714 (1%) Strand=Plus/Minus Query 104888 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGAC 104947 ||| | |||||||| || |||| ||||||||||| | || | ||||||||||| || Sbjct 953853 TGGTATGCTATTCTTGAGGCTCAGACCGAGACTGGCAACCCCTTTATGCTTTACAAGGAT 953794 Query 104948 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGT 105007 ||||| ||| | ||||| || || ||||| |||| || || |||||||| || Sbjct 953793 GCCTGCAACAAGAAGAGCAACCAGAAGAACCTGGGAACTATTCGCAGCTCCAATCTTTGC 953734 Query 105008 ACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATC 105067 || || ||| | || | | | || || ||||| || ||||| || || || Sbjct 953733 ACGGAGATCATTGAGTACAGTGCTCCTGACGAAGTTGCTGTCTGCAACCTGGCTTCTCTC 953674 Query 105068 GCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATT-TGATTATGAAAAACTCCACGA 105126 || || || | | ||| || | | | || | | ||| | | || || ||||| Sbjct 953673 GCGCTTCCTACTTTTGTCGACGCGGCC-CGTGGAGAGTATGACTTCGGCAAGCTGCACGA 953615 Query 105127 AGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT 105186 ||| | | | ||| | |||| |||||||| ||| | ||||| || Sbjct 953614 GGTTGTGCAGGTCTTGGTTCGTAACTTGAACAAGATTATTGATGTAAACTACTACCCTGT 953555 Query 105187 TG-AGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTC 105245 | ||| | | | | | || ||| | || || || |||| ||| ||||| | ||| Sbjct 953554 TCCAGAGGCCAAGAAGAGC-AACATGCGGCATCGCCCCATTGCTCTTGGTGTCAATGGTT 953496 Query 105246 TCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATC 105304 | || |||| ||| || | || |||| | || || |||| |||||| | | | Sbjct 953495 TGGCCGATGCCTTCCTTGCCCTG-CGCCTGCCGTTCGACTCCGCCGAAGCAAGACAGCTA 953437 Query 105305 AATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAG-GCGAGTTCAGAGTTGGC 105363 || | || ||||||||||| ||||||| ||| |||| || || ||| |||| Sbjct 953436 AACATCCAGATCTTTGAGACCATCTATCACGGTGCT-TTGACTGCATCTTGTGAGCTGGC 953378 Query 105364 AGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCA 105423 ||| |||||| |||||||| | ||||| || || | || || || | || || Sbjct 953377 CAAGGAGTTTGGTCCTTATGAAACTTACGAGGGCTCCCCCGTCTCTCAGGGTATTCTCCA 953318 Query 105424 ATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGGGAAGCTCTCAAGGAACG 105483 | |||||||||||| | ||| | | || |||||||| |||| |||| Sbjct 953317 GTATGATATGTGGGACAGAACCCCCACGGACCTCTGGGACTGGGATTCTCTGAAGGCGAA 953258 Query 105484 CATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCAC 105543 || || | ||| ||||||||||| | | |||| || ||||| || || ||| Sbjct 953257 GATTGCCCAGCACGGTGTTCGTAACAGTTTGTTGGTGGCACCGATGCCCACCGCAAGCAC 953198 Query 105544 CGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA 105597 | || || |||| || ||||| ||||| || ||||| |||||||||| Sbjct 953197 CAGCCAGATTCTGGGCTTCAACGAATGTTTTGAGCCTTACACCTCGAACATCTA 953144 >seq8 Length=1785946 Score = 89.7 bits (98), Expect = 6e-13 Identities = 216/325 (66%), Gaps = 19/325 (6%) Strand=Plus/Minus Query 9614 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9673 |||||||||||||| |||| | ||||| | || ||||| |||||||| || Sbjct 1109535 AAACCATCCATCTCCGTCAGGATCTGGTTCAGGGTGCTCTCCCGCTCATCATTACCT--- 1109479 Query 9674 ATACCACC--AGCACTGCGTTGCTTT-------CCCACGGCATCAATCTCATCAATGAAG 9724 |||| ||| ||| | ||| | || | ||||| || |||||||||||| Sbjct 1109478 ---CCACTGAAGCTCTGTTTAGCTCTAGATTTACCAATAGCATCGATTTCATCAATGAAG 1109422 Query 9725 ACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCC 9784 | |||||| || ||| | || ||| | || ||||| || ||||| | || Sbjct 1109421 ATGATGCAAGGGGCATTCTTCCGGGCGTTGGCGAAAAGATCACGGACACGGGAAGGACCG 1109362 Query 9785 ACACCAACAAACATCTCCACAAAGTTTG--CGGCGGAACATTGGATGAAGGGGACATTAG 9842 |||||||| |||||||| || || | | | || || | || ||| || || | Sbjct 1109361 ACACCAACGAACATCTCGACGAACTCGGAACCGCTGACGCT--GAAGAAAGGCACGCCGG 1109304 Query 9843 ATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGA 9902 ||||||| ||| |||| ||||| | |||||||| || || || ||| | ||||| Sbjct 1109303 ATTCACCAGCAGTGGCCTTTGCGAGCAATGTCTTACCTGTGCCGGGAGGACCTGAGAGGA 1109244 Query 9903 GGGCACCTCGTGGAATCTTGGCGCC 9927 |||||| || || |||||||| || Sbjct 1109243 TGGCACCGCGAGGGATCTTGGCACC 1109219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260610440240