Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20fumigatus_20[genbank_20GCA_5F001599 455.1_202016-03-01] 26 sequences; 28,388,732 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq7 214 5e-50 seq3 163 9e-35 seq6 132 1e-25 seq5 102 2e-16 >seq7 Length=1968185 Score = 214 bits (236), Expect = 5e-50 Identities = 488/730 (67%), Gaps = 7/730 (1%) Strand=Plus/Minus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 ||||| | || || || || ||||| || || || ||||| | ||| | | |||| | Sbjct 135137 CCGCTGTCGGTATTGACTTGGGTACCACCTACTCCTGTGTGGGTGTCTTCAGAGATGACC 135078 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 | | ||||| ||||| || || || |||||| | || || || || | ||| || || | Sbjct 135077 GCATTGAAATCATTGCCAACGACCAGGGTAACCGTACTACTCCCTCGTTCGTGGCTTTCA 135018 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376 |||| || |||||| | || |||||| | || || ||||| | || || || | | Sbjct 135017 CCGACACCGAGCGTCTCATCGGTGATGCCGCCAAGAATCAGGTCGCCATGAACCCTCACA 134958 Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACA 349434 | || ||||| ||||||||||| || || ||| | | || || | | | || Sbjct 134957 ACACCGTTTTCGATGCTAAGCGTCTGATCGGTCGTCGGTTCCAAGATGCTGAGGTTCAG- 134899 Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494 |||||| | || || | ||||| | ||||| | | ||| || | || || || || Sbjct 134898 -TCTGATATGAAGCACTGGCCTTTCAAGGTTGT-CGAGAAG--GGCGGCAAGCCCATCAT 134843 Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554 ||||||||| | || || || || || || || ||||| || || || ||||| Sbjct 134842 TGAGGTTGAGTTCAAGGGCGAGACCAAGCAGTTCACCCCTGAAGAGATCTCCTCCATGGT 134783 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614 | || ||| || | |||||||| || | |||| || || | | ||||| Sbjct 134782 CCTGACCAAGATGCGTGAGACCGCTGAAGCCTACCTCGGTGGCACTGTCAACAACGCTGT 134723 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 || || || || ||||| || || || | |||||| || || || |||||||| Sbjct 134722 CATCACCGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCCACTAAGGATGCTGGTCT 134663 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 ||| || || | || || || | || || || || || ||||| || || ||||| || Sbjct 134662 CATCGCCGGCCTGAACGTCCTCCGTATCATCAACGAGCCTACTGCCGCTGCCATTGCCTA 134603 Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 || ||||| || | | || || || | || || || ||| | |||||||| Sbjct 134602 CGGTCTTGACAAGAAGGCCGAGGGCGAGCGTAACGTCCTGATCTTCGATCTTGGTGGTGG 134543 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854 |||||| ||||| || || || || |||| ||||| || || || || || || || || Sbjct 134542 TACTTTCGATGTTTCCCTCCTGACCATTGAGGAGGGTATCTTCGAGGTCAAGGCTACCGC 134483 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914 |||||| || || || ||||| || || || || || ||||| ||| || |||||||| Sbjct 134482 TGGTGACACTCACCTGGGTGGTGAGGACTTCGACAACCGTCTTGTTAACCACTTTGTTAA 134423 Query 349915 AGAATTTAAG 349924 ||||| ||| Sbjct 134422 TGAATTCAAG 134413 >seq3 Length=3005802 Score = 163 bits (180), Expect = 9e-35 Identities = 177/232 (76%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| | | || || ||||| || || || || ||||| ||||| ||||| Sbjct 1935988 CATGCCACCACGCAGACGGAGGACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAATC 1935929 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| || || || |||||||||||||| |||||||||||||| ||||| || |||||||| Sbjct 1935928 AGACAAGGTACGGCCATCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCAGG 1935869 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685 ||| || || || |||||||| || || ||| || ||||| || || | || || | | Sbjct 1935868 AGGGATACCCTCCTTATCCTGGATCTT-GCTCTTGACATTGTCGATGGTGTCTGAAGACT 1935810 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | ||||| | ||| | |||||||| || || || || || || || ||||| Sbjct 1935809 CTACTTCTAATGTGATAGTCTTTCCCGTGAGAGTCTTAACGAAGATTTGCAT 1935758 Score = 131 bits (144), Expect = 5e-25 Identities = 174/238 (73%), Gaps = 3/238 (1%) Strand=Plus/Minus Query 140501 ATTTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATT 140560 |||| ||| |||||||| | | || || || || || || ||| ||||||||||| Sbjct 1936221 ATTTAGCAT-CCACCACGCAGACGCAGCACCAGGTGGAGCGTGCTCTCCTTTTGAATATT 1936163 Query 140561 ATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTG 140620 ||||| || | || | ||||||||| | || || ||||| ||||| ||||| ||||| Sbjct 1936162 GTAATCGGAGAGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTG 1936103 Query 140621 ATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTT-ACATTATCAATCGAATCAG 140679 |||||||| || || || || || || || || ||| || || || ||||||| || | Sbjct 1936102 GTCAGGAGGGATGCCCTCCTTGTCTTGGATCTT-GCTCTTCACGTTGTCAATCGTGTCGG 1936044 Query 140680 ATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | | || || || || |||| ||||||||||| || || || || || |||||||| Sbjct 1936043 AGGACTCCACCTCCAGGGTAATGGTCTTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 1935986 Score = 125 bits (138), Expect = 2e-23 Identities = 171/236 (72%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| |||||||| | | ||||| || || |||||||| || || || || |||| Sbjct 1935456 TTTGCATGCCACCACGAAGACGGAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTAT 1935397 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| || | || || ||||| || || || || ||||| || || | || ||||| | Sbjct 1935396 AATCGGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGT 1935337 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 ||||||| || || || ||||||||||| || | || ||||| ||||| | || | || Sbjct 1935336 CAGGAGGGATACCCTCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTC-GCTG 1935278 Query 140683 G-TTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || | || | ||||| || || || || || || ||||||||||| Sbjct 1935277 GACTCGACCTCCAAGGTGATGGTCTTGCCCGTGAGAGTCTTGACGAAAATCTGCAT 1935222 Score = 122 bits (134), Expect = 3e-22 Identities = 163/224 (73%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || || || ||||| || || || ||||| |||| Sbjct 1935764 TTTGCATACCACCACGAAGACGAAGGACGAGGTGGAGAGTCGATTCCTTCTGAATGTTAT 1935705 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || || || || ||||| || | || || ||||| || || ||||| ||||| | Sbjct 1935704 AGTCGGACAAGGTGCGGCCATCCTCCAACTGCTTGCCAGCGAAAATCAGACGCTGCTGGT 1935645 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 ||||||| || || || || ||||| || || | || || |||||||| | ||| | || Sbjct 1935644 CAGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTAACGTTATCAATGGTATC-GCTG 1935586 Query 140683 G-TTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 | ||| || || || |||| ||||| || || || || || || Sbjct 1935585 GATTCCACCTCGAGAGTAATGGTCTTGCCAGTGAGGGTCTTGAC 1935542 >seq6 Length=2008369 Score = 132 bits (146), Expect = 1e-25 Identities = 330/495 (67%), Gaps = 11/495 (2%) Strand=Plus/Minus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 ||||| || || |||||||| ||||| || ||| || ||| || || || || || Sbjct 1038520 GCTGTCATCACCGTACCAGCTTATTTCAACGATAATCAACGTCAGGCGACGAAGGACGCA 1038461 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || |||||| || ||||||||||| | || || ||||| |||||||| || || || Sbjct 1038460 GGTGCCATTGCCGGTTTAAATGTTCTCCGCATCATCAATGAGCCCACTGCCGCCGCTATC 1038401 Query 349730 GCATATG-----GGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATT 349784 || |||| |||| ||||| || |||| ||| | || || | |||| Sbjct 1038400 GCCTATGGACTCGGCTCCGGAAAAT--CCGAAAAAGAGCGTAATGTCCTGATCTATGATC 1038343 Query 349785 TAGGTGGTGGTACTTTTGATGTATCACTACT-AACACTTGAAGAGGGAATTTTTGAAGTT 349843 | ||||| |||||||| ||||| || || || |||| | ||| || |||| || Sbjct 1038342 TTGGTGGAGGTACTTTCGATGTGTCTCTTCTCAACA-TCCAAGGAGGTGTTTTCACTGTC 1038284 Query 349844 AAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCG 349903 || || || || |||||||| ||||| |||||| |||||||||| | ||| || Sbjct 1038283 AAGGCCACAGCCGGTGATACTCATCTCGGTGGACAAGATTTTGACACCAACCTCCTTGAA 1038224 Query 349904 CATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCA 349963 || || || ||||| || | || || ||| | || || | ||||| Sbjct 1038223 CACTTCAAGAAGGAATTCCAGAAGAAGACTGGAAAGGATCTCTCAGGCGATGCCAGAGCT 1038164 Query 349964 ATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAA 350023 | || || | ||||| || || || ||||| |||||| | | || |||| || Sbjct 1038163 CTTCGCCGTTTGAGAACGGCCTGCGAGCGTGCCAAGCGTACACTGTCCAACGCTACACAG 1038104 Query 350024 ACCTCTATTGAAATTGATTCTCTTGCT-GATGGCAAAGATTTCTTTTCATCTATTACACG 350082 || || |||| ||||| ||| ||| | ||||| | |||||| || ||||| || || Sbjct 1038103 ACAACTGTTGAGATTGACTCT-TTGTTCGATGGAGAGGATTTCAACTCGTCTATCACTCG 1038045 Query 350083 TGCTCGGTTTGAAGA 350097 ||| || ||||| || Sbjct 1038044 TGCCCGCTTTGAGGA 1038030 >seq5 Length=2594130 Score = 102 bits (112), Expect = 2e-16 Identities = 206/306 (67%), Gaps = 0/306 (0%) Strand=Plus/Minus Query 378168 GTTTCTTACAGTCATATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCG 378227 |||||| ||||| ||||| ||||||| | ||||| || || |||| || || Sbjct 1705357 GTTTCTGACAGTACCGTCATACTTAACCATGACCTCTTCCAAGGCCTTAACCAGCTTCCG 1705298 Query 378228 AGAAATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACC 378287 |||||||||||||| ||| || || |||||||| || | ||| | ||||| | Sbjct 1705297 CTGAATATAACCAGTTTCGGCAGTCTTGACGGCAGTATCGATCAGACCTTCTCGACCGGC 1705238 Query 378288 CATTGCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAA 378347 ||| ||||| ||||| |||||||| || || || |||| | | | || | || | ||| Sbjct 1705237 CATGGCATGAAAGAAGAATTCAGTTGGGGTTAGGCCACGCAGATAAGAGTTTTCCACAAA 1705178 Query 378348 TCCTCTTGCGCCTGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAA 378407 ||| | | | || || | ||||| || || |||| || | ||||||| | || Sbjct 1705177 TCCGCGAGATTCCGGAGAGTAATCATCCTTGGTGAAATGGGGAAGAGTACGATATTTGAA 1705118 Query 378408 CCCATATGGAATTCGTTTTCCATCAACATTCTGTTGACCAAGTGCAGAAACCATTTGAGC 378467 || | ||||| || || || || || ||| ||||| | ||| | ||| |||| Sbjct 1705117 TCCGAAAGGAATACGCTTGCCTTCGACGGACTGCTGACCCACAACAGCAGTCATCTGAGA 1705058 Query 378468 AATATT 378473 ||||| Sbjct 1705057 GATATT 1705052 Score = 87.8 bits (96), Expect = 5e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 377494 ACACCAGCAAAGTGGAAAGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGC 377553 ||||||||||||||||||||||| | || | || |||| |||||||||||| ||||| Sbjct 1706049 ACACCAGCAAAGTGGAAAGTATTCAAGGTCATCTGTGTAGCGGGCTCACCAATAGACTGA 1705990 Query 377554 GCTGCAATAACGCCAACCATTTCTCCAGGATTGACAATAGCCT 377596 || || | || ||||||||||| || || || || ||||| Sbjct 1705989 GCGGCTAGCACACCAACCATTTCACCTGGGTTAGCAGCAGCCT 1705947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515253895230878