Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20fumigatus_20[genbank_20GCA_5F001599 455.1_202016-03-01] 26 sequences; 28,388,732 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq3 161 1e-34 seq2 111 2e-19 >seq3 Length=3005802 Score = 161 bits (178), Expect = 1e-34 Identities = 383/576 (66%), Gaps = 2/576 (0%) Strand=Plus/Minus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 || ||| || | || ||||| || ||||| ||||| |||||| || | | | | Sbjct 954576 CCGCAGCACTTGTTGATGCGTGTTGCGGTTGGCATTCATGGCAACAATATTGAAAAGGCC 954517 Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222 ||||| ||| |||| ||| ||||| | |||||| || || | || || || ||| Sbjct 954516 ATTGAGACCTACCACCTCATGTCTCAGAAATACTTCACTCATGCTTCTCCTACTCTGTTC 954457 Query 19223 AACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGAC 19282 || || ||||| | | || ||| | || || ||||| || | ||||||||| || Sbjct 954456 AATGCTGGTACTCCCCAACCCCAGCTTGCGTCTTGCTTCCTCGTCGATATGAAGGAGGAT 954397 Query 19283 AGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGG 19342 ||||||||||| |||||||| || || ||| || || ||||| ||| | || Sbjct 954396 AGCATTGAGGGTATCTACGACACCCTTAAGACTTGTGCCATGATCTCGAAGACAGCTGGC 954337 Query 19343 GGTATCGGGATCCACTGCTCGAAT-ATCCGGTCGAGTGGTACACGAATCAATGGGACGAA 19401 |||||||| | || | || ||||| | | || | || ||| || || Sbjct 954336 GGTATCGGCCTTAAC-GTTCACCGCATCCGTGCCACAGGCTCCTACATTGGTGGCACTAA 954278 Query 19402 CGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGT 19461 || | ||||||| || || ||||| ||||| ||||||||||| || ||||| || Sbjct 954277 TGGGTCCTCTAACGGTATTGTTCCCATGCTTCGCGTGTTCAACAACACTGCTAGGTATGT 954218 Query 19462 CAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGC 19521 | ||||||| || ||| ||| ||| | || || || ||||||||||| ||||| || Sbjct 954217 CGACCAGGGAGGTAACAAGCGCCCTGGCGCTTTTGCTATTTACCTCGAGCCTTGGCATGC 954158 Query 19522 GGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCG 19581 || || | || ||||| || || ||| |||||| ||| | ||||| | | || Sbjct 954157 CGATATCTTCGAGTTCCTGGATCTTCGCAAGAACCACGGTAAGGAGGAAGTCAGAGCCCG 954098 Query 19582 CGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGA 19641 || || ||| ||| |||||| || || || |||||| || |||||| ||| Sbjct 954097 TGATCTGTTCTACGCCCTGTGGACCCCTGATCTGTTCATGAAGCGAGTTGAGTCCAACGG 954038 Query 19642 AGAATGGCACCTGATGTGCCCGCACGAATGCCCTGG 19677 || ||| ||| | ||||| | ||| |||||| Sbjct 954037 TGACTGGACTCTGTTCTGCCCCAATGAAGCCCCTGG 954002 Score = 141 bits (156), Expect = 1e-28 Identities = 391/597 (65%), Gaps = 2/597 (0%) Strand=Plus/Plus Query 79306 TCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCG 79365 || ||||| ||||| | || || ||| || | ||||| | ||| |||||| || Sbjct 953981 TCACCATAAACATCTGCCAAACCAGGGGCTTCATTGGGGCAGAACAGAGTCCAGTCACCG 954040 Query 79366 TCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGG 79425 | |||||| || |||||| || || ||| |||||||||| ||| || || ||| Sbjct 954041 TTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGGGCGTAGAACAGATCACGG 954100 Query 79426 CAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCG 79485 | | ||||| | || |||||| || || || || || || | ||| ||||| Sbjct 954101 GCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAGGAACTCGAAGATATCGGCA 954160 Query 79486 TGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACG 79545 ||||| ||||| || || || || || | || ||||||| || ||||||| ||| Sbjct 954161 TGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTGTTACCTCCCTGGTCGACA 954220 Query 79546 TACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTC 79605 |||| || ||||||||||| || || |||||||| || || |||| | | || || Sbjct 954221 TACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAGGACCCATTA 954280 Query 79606 GTCCCGTTGATTCGTGTACCGCTCGCCCGAATG-TTCGAGCAGTGGATTCCGATGCCCCC 79664 || || || | || | || || ||| || | || | ||||| || || Sbjct 954281 GTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAAC-GTTAAGGCCGATACCGCC 954339 Query 79665 GGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTC 79724 | ||| ||||| || || ||| || || |||||||| ||||| || || Sbjct 954340 AGCTGTCTTCGAGATCATGGCACAAGTCTTAAGGGTGTCGTAGATACCCTCAATGCTATC 954399 Query 79725 GTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAA 79784 ||||||||| |||| |||||||| || | ||| || | | ||||| || ||||| Sbjct 954400 CTCCTTCATATCGACGAGGAAGCAAGACGCAAGCTGGGGTTGGGGAGTACCAGCATTGAA 954459 Query 79785 GAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGAC 79844 || || || | || || |||||| | || || ||| || | ||| ||||| || | Sbjct 954460 CAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTAGGTCTCAATGGC 954519 Query 79845 GCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTGGGG 79901 | | || ||| || ||||| ||||| || ||||| || | || ||| || Sbjct 954520 CTTTTCAATATTGTTGCCATGAATGCCAACCGCAACACGCATCAACAAGTGCTGCGG 954576 >seq2 Length=3755792 Score = 111 bits (122), Expect = 2e-19 Identities = 288/425 (68%), Gaps = 18/425 (4%) Strand=Plus/Plus Query 60003 GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGC 60062 ||||| |||||||| |||||||| || || | | || |||||||| || ||||||||| Sbjct 649910 GTGGAGGGAATCTTTTTCTCTGGATCTTTTGCTTCCATCTTCTGGCTGAAGAAGCGTGGC 649969 Query 60063 CTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAG 60122 | ||||| || || | ||||||||||||||| || || || |||||||| || || Sbjct 649970 TTGATGCCTGGTCTCACTTTCTCCAACGAGCTCATCTCTCGTGACGAGGGACTGCACACA 650029 Query 60123 GAGTTTGCAGTGAC-GCTCTATTCACACCTATTGGAAAAATGCCCTTCC---AAGGATAT 60178 || ||||| || | |||| ||| ||| ||| | | |||| | |||| ||| Sbjct 650030 GACTTTGC-TTGCCTTCTCTTTTCTCAC---TTGAACCATCGCCCCGACAAGAAGGTTAT 650085 Query 60179 TCACAAGATTGTTCAGTG-GGCT-TGTGAAGTGGAGAGCGAGTTCATCACAGAAGCGCTT 60236 | | | ||| || || |||| || | || | || |||||| | ||||| || ||| Sbjct 650086 TGAGGATATT-ATCGTTGAGGCTGTGGCCATTGAACAG-GAGTTCTTGACAGACGCTCTT 650143 Query 60237 CC--ATGCAAACTCATAGGTATGGACGCTGGAGAAATGACGCAGTACATTCAGTTTGTCG 60294 || ||| ||| | || ||| || || |||| ||||| ||| |||| || | Sbjct 650144 CCTGTTGC--TCTCCTGGGCATGAACTCTAAGCTAATGTGCCAGTATATTGAGTTCGTTG 650201 Query 60295 CGGACCGCCTCATGGCCCAGTTTGGAGA-AGGACCAATTTACGGCGTGAATAACCCTTTC 60353 | || || || ||| ||||| | | || | || | | ||||| ||| Sbjct 650202 CTGATCGGCTGTTGGTTGCTCTTGGAAACAAGAAGTACTT-CAACTCTCCCAACCCCTTC 650260 Query 60354 GACTGGATGGAGACCATCTCGTTGGAAGGGAAGACCAACTTCTTTGAGAAGCGGGTCGGG 60413 |||| ||||| | |||||| | | ||| ||||| ||||||||||||||||| || || Sbjct 650261 GACTTCATGGAAAGTATCTCGCTTGCAGGAAAGACGAACTTCTTTGAGAAGCGTGTTGGT 650320 Query 60414 GATTA 60418 || || Sbjct 650321 GACTA 650325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524621729440