Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20fumigatus_20[genbank_20GCA_5F001599 455.1_202016-03-01] 26 sequences; 28,388,732 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq3 145 8e-30 >seq3 Length=3005802 Score = 145 bits (160), Expect = 8e-30 Identities = 312/460 (68%), Gaps = 6/460 (1%) Strand=Plus/Minus Query 53242 TGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAA 53301 |||||| ||| || | ||| || || ||||| || || || | || || |||||||| Sbjct 954514 TGAGACCTACCACCTCATGTCTCAGAAATACTTCACTCATGCTTCTCCTACTCTGTTCAA 954455 Query 53302 CGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTC 53361 |||||||| || || ||| | || |||||||| || | |||||||| || Sbjct 954454 TGCTGGTACTCCCCAACCCCAGCTTGCGTCTTGCTTCCTCGTCGATATGAAGGAGGATAG 954395 Query 53362 GATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGG 53421 || || || |||||||| || || ||| |||||| ||||| ||| | || || Sbjct 954394 CATTGAGGGTATCTACGACACCCTTAAGACTTGTGCCATGATCTCGAAGACAGCTGGCGG 954335 Query 53422 TATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAAC 53479 |||||| | || | || | || ||||||| | ||| | || || || || Sbjct 954334 TATCGGCCTTAAC-GTTC-ACCGCATCCGTGCCACAGGCTCCTACATTGGTGGCACTAAT 954277 Query 53480 GGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTC 53539 || | | | || || || || ||||| ||||| ||||||||||| || |||| ||| Sbjct 954276 GGGTCCTCTAACGGTATTGTTCCCATGCTTCGCGTGTTCAACAACACTGCTAGGTATGTC 954217 Query 53540 AACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCC 53599 ||||||| ||| |||||| || | || || || ||||||||||| ||||| ||| Sbjct 954216 GACCAGGGAGGTAACAAGCGCCCTGGCGCTTTTGCTATTTACCTCGAGCCTTGGCATGCC 954157 Query 53600 GACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGT 53659 || || | ||||| || || || || ||| || ||| | || || | | |||| Sbjct 954156 GATATCTTCGAGTTCCTGGATCTTCGCAAGAACCACGGTAAGGAGGAAGTCAGAGCCCGT 954097 Query 53660 GACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATG 53698 || ||||| ||| || ||||||| || || || |||||| Sbjct 954096 GATCTGTTCTAC-GCCCTGTGGACCCCTGATCTGTTCATG 954058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215822154800