Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20fumigatus_20[genbank_20GCA_5F001599 455.1_202016-03-01] 26 sequences; 28,388,732 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq3 93.3 3e-14 >seq3 Length=3005802 Score = 93.3 bits (102), Expect = 3e-14 Identities = 184/270 (68%), Gaps = 2/270 (1%) Strand=Plus/Minus Query 30188 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAA 30247 ||||| || || ||| || | ||| || | | | ||| ||||||| || |||||| Sbjct 483188 AGCTGGTCGACGCCCTGGCCTGTGTAATCCGTCTTGGCGTCGATGTACTCGGCCCCGAAA 483129 Query 30248 TGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCC 30307 |||| |||||||||||| ||||| || || || || || | || | |||| ||| |||| Sbjct 483128 TGCCGCCACTGGAACCCATACACAGGGCCTAGATCGCCGACCTCGCGGTGCCCGA-GCCC 483070 Query 30308 CTCTT-GTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAGA 30366 ||| ||||| || || | | ||||| |||||||||| || | || || || Sbjct 483069 AACTTTGTCCAGGAACTCGCGGCTGCCGTTACCGTCCCAGATTTTGATGCCTGCTTCCGA 483010 Query 30367 GAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTT 30426 ||| ||||| ||| | || || |||||| || ||||| | | |||||| Sbjct 483009 GAGGGGGATGGAGGAGGTGCATCCGGAGATGAACCAGAGGAGCTCGGCGATGACGGCACG 482950 Query 30427 CCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 | || || | ||||| ||||||||||| Sbjct 482949 CAGGAAAACGCGTTTGGTGGTGAGGAGGGG 482920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406310271250392