Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20fumigatus_20[genbank_20GCA_5F001599 455.1_202016-03-01] 26 sequences; 28,388,732 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq3 129 4e-25 >seq3 Length=3005802 Score = 129 bits (142), Expect = 4e-25 Identities = 162/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| ||||| ||||| ||||||||||||||||| || ||||| || || || | | Sbjct 1936203 AGACGCAGCACCAGGTGGAGCGTGCTCTCCTTTTGAATATTGTAATCGGAGAGGGTCCTC 1936144 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| | || ||||| || || || | |||||| ||||| || || | |||||| Sbjct 1936143 CCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGGATGCCCTCC 1936084 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| |||| || | || ||| | ||| ||||| | |||||| |||| ||| Sbjct 1936083 TTGTCTTGGATC-TTGCTCTTCACGTTGTCAATCGTGTCGGAGGACTCCACCTCCAGGGT 1936025 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || || ||||| | || || || || ||||||||| Sbjct 1936024 AATGGTCTTTCCGGTGAGAGTCTTGACGAAGATCTGCATG 1935985 Score = 86.0 bits (94), Expect = 4e-12 Identities = 161/234 (69%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || | |||||| | |||| || ||||| ||||| || ||||||||||| || Sbjct 1935449 GCCACCACGAAGACGGAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAATCGGA 1935390 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || || | || || || || || || || || || || ||||| ||||| || || Sbjct 1935389 AAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAGGAGG 1935330 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | |||||||| || ||| || | || || | ||| ||||| | ||| | Sbjct 1935329 GATACCCTCCTTATC-CTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGA 1935271 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA 34711 | |||| ||| || || || || || | || || || |||||||||||| ||| Sbjct 1935270 CCTCCAAGGTGATGGTCTTGCCCGTGAGAGTCTTGACGAAAATCTGCATGGTGA 1935217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729500270058