Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20fumigatus_20[genbank_20GCA_5F001599 455.1_202016-03-01] 26 sequences; 28,388,732 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq3 170 4e-37 seq7 127 5e-24 seq1 89.7 1e-12 >seq3 Length=3005802 Score = 170 bits (188), Expect = 4e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || ||| ||| ||||| || || ||||| | |||||||| |||||| Sbjct 1936197 AGCACCAGGTGGAGCGTGCTCTCCTTTTGAATATTGTAATCGGAGAGGGTCCTCCCATCT 1936138 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| |||||| || |||||||| || || || ||||||||||| | || |||||||| Sbjct 1936137 TCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCT 1936078 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| || || ||||| ||| || ||||| || || || ||| Sbjct 1936077 TGGATCTTGCTCTTCACGTTGTCAATCGTGTCGGAGGACTCCACCTCCAGGGTAATGGTC 1936018 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||||||||| || || | |||||| Sbjct 1936017 TTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 1935986 Score = 154 bits (170), Expect = 3e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||| ||||| ||||| || || || || |||||||| || | | ||| Sbjct 1935751 ACGAAGACGAAGGACGAGGTGGAGAGTCGATTCCTTCTGAATGTTATAGTCGGACAAGGT 1935692 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| |||| ||||||||| ||||| || || || || ||||||||||| | || Sbjct 1935691 GCGGCCATCCTCCAACTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCAGGAGGGATACC 1935632 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||||||||| || ||||| || ||||| || | ||| |||||||| Sbjct 1935631 CTCCTTGTCCTGGATCTTCGACTTAACGTTATCAATGGTATCGCTGGATTCCACCTCGAG 1935572 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTAC 211102 ||| || ||||| || ||||| ||||| || Sbjct 1935571 AGTAATGGTCTTGCCAGTGAGGGTCTTGAC 1935542 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || ||||| ||||| || || || |||||||||||||| | ||| || Sbjct 1935443 ACGAAGACGGAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAATCGGAAAGAGT 1935384 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| || ||||||||||| ||||| || | ||| || ||||||||||| | || Sbjct 1935383 GCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAGGAGGGATACC 1935324 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||| ||||| ||||| || || || || || ||||| | || ||||| | Sbjct 1935323 CTCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGACCTCCAA 1935264 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| |||||||||||||| || || | |||||| Sbjct 1935263 GGTGATGGTCTTGCCCGTGAGAGTCTTGACGAAAATCTGCAT 1935222 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || || || ||||| || |||||||| || ||||| | | ||| | |||||| Sbjct 1935969 AGGACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAATCAGACAAGGTACGGCCATCT 1935910 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || ||||| || || ||||| || || ||||| |||||||| | || ||||| ||| Sbjct 1935909 TCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCAGGAGGGATACCCTCCTTATCC 1935850 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||||||||| || || || || | ||||| ||| Sbjct 1935849 TGGATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCTACTTCTAATGTGATAGTC 1935790 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||||||||||||||| || || | ||||| Sbjct 1935789 TTTCCCGTGAGAGTCTTAACGAAGATTTGCAT 1935758 Score = 86.0 bits (94), Expect = 1e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 178259 CCATAGACATCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCT 178318 ||||| ||||| | | ||| || || |||||||||||||| ||| |||| | ||||| Sbjct 953984 CCATAAACATCTGCCAAACCAGGGGCTTCATTGGGGCAGAACAGAGTCCAGTCACCGTTG 954043 Query 178319 TCCTTCACTCGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAAAATCTCTCTGGCT 178378 || ||||| |||||||| || |||| |||||| | ||| ||||| | || | |||| Sbjct 954044 GACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGGGCGTAGAACAGATCACGGGCT 954103 Query 178379 CT 178380 || Sbjct 954104 CT 954105 >seq7 Length=1968185 Score = 127 bits (140), Expect = 5e-24 Identities = 138/182 (76%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || || ||||| || || ||||| | ||||| || |||||||| || |||||||| Sbjct 1069536 TTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 1069477 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 ||||| || |||||||| |||| || ||||||||||||||||| || ||||| ||| Sbjct 1069476 AGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 1069417 Query 211047 ATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103 |||||||| ||| ||||| ||||| || || ||||| ||||| || ||||| || Sbjct 1069416 ATGGTGTC---GCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 1069360 Query 211104 AA 211105 || Sbjct 1069359 AA 1069358 >seq1 Length=3959504 Score = 89.7 bits (98), Expect = 1e-12 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || ||||| || |||||||| || || | ||||| | || || Sbjct 2216357 AGCACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGACCGTCC 2216416 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 || ||||||||||| |||||||| || || || ||||| || || | ||| |||||||| Sbjct 2216417 TCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGGGGGGATTCCCTCCTTGTC 2216475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151613857490