Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20fumigatus_20[genbank_20GCA_5F001599 455.1_202016-03-01] 26 sequences; 28,388,732 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq3 165 6e-36 >seq3 Length=3005802 Score = 165 bits (182), Expect = 6e-36 Identities = 174/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 44110 TCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC 44169 ||| || | ||| | || ||||||||| ||||||||||||||||| || |||||||||| Sbjct 1936213 TCCACCACGCAGACGCAGCACCAGGTGGAGCGTGCTCTCCTTTTGAATATTGTAATCGGA 1936154 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 ||| | | | || |||| |||||| || || ||||| | ||||||||| || | ||| Sbjct 1936153 GAGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGG 1936094 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCAC 44289 | || ||||| || ||||| ||||| | | || ||||||| ||| ||||| Sbjct 1936093 GATGCCCTCCTTGTCTTGGATCTTGCTCTTCACGTTGTCAATCGTGTCGGAGGACTCCAC 1936034 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| ||||| |||||||| ||||| ||||| |||||||| |||||| Sbjct 1936033 CTCCAGGGTAATGGTCTTTCCGGTGAGAGTCTTGACGAAGATCTGCATG 1935985 Score = 122 bits (134), Expect = 6e-23 Identities = 157/212 (74%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTC 44187 ||||| || || ||| ||||||||||| |||||||| | | || | || | || || Sbjct 1935966 ACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAATCAGACAAGGTACGGC-CATCTTC 1935908 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || ||||| || |||||||| | |||||| ||||| | ||| | ||| ||||| ||| Sbjct 1935907 AAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCAGGAGGGATACCCTCCTTATCCTG 1935848 Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||| || ||| | |||||||| | || || || || | || || ||| Sbjct 1935847 GATCTTGCTCTTGACATTGT--CGATGGTGTCTGAAGACTCTACTTCTAATGTGATAGTC 1935790 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||||| ||||| |||||||||||||| Sbjct 1935789 TTTCCCGTGAGAGTCTTAACGAAGATTTGCAT 1935758 Score = 114 bits (126), Expect = 9e-21 Identities = 149/201 (74%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTC 44187 || ||||| || || ||||| || ||||| || |||| | || || || | || || Sbjct 1935738 ACGAGGTGGAGAGTCGATTCCTTCTGAATGTTATAGTCGGACAAGGTGCGGC-CATCCTC 1935680 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || |||||| || || || |||| ||||||||| || | ||| | ||| ||||| ||| Sbjct 1935679 CAACTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTG 1935620 Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||| || ||| | ||||| ||| |||||||||||| | ||||| |||| Sbjct 1935619 GATCTTCGACTT-AACGTTATCAATGGTATCGCTGGATTCCACCTCGAGAGTAATGGTCT 1935561 Query 44307 TTCCCGTGAGGGTCTTCACGA 44327 | || ||||||||||| |||| Sbjct 1935560 TGCCAGTGAGGGTCTTGACGA 1935540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990285928042