Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20var._20fumigatus_20[genbank_20GCA_5F001599 455.1_202016-03-01] 26 sequences; 28,388,732 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq3 152 1e-31 seq7 102 2e-16 >seq3 Length=3005802 Score = 152 bits (168), Expect = 1e-31 Identities = 158/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || |||||||| || || || |||||| | ||||| || | ||| Sbjct 1935225 CAGATTTTCGTCAAGACTCTCACGGGCAAGACCATCACCTTGGAGGTCGAGTCCAGCGAC 1935284 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| ||||||||||| || || || |||||||| |||||||| Sbjct 1935285 ACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCAGCAG 1935344 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || ||||| || || |||||||| ||||| | |||||| ||||||||||| || Sbjct 1935345 CGCTTGATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTTTCCGATTATAACATC 1935404 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || ||||| || ||||| || ||| Sbjct 1935405 CAGAAGGAATCTACTCTGCACCTGGTT 1935431 Score = 145 bits (160), Expect = 2e-29 Identities = 158/207 (76%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || |||||||| ||||| || ||||| | || || || |||||| Sbjct 1935761 CAAATCTTCGTTAAGACTCTCACGGGAAAGACTATCACATTAGAAGTAGAGTCTTCAGAC 1935820 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| ||||| || || || |||||||| || || || Sbjct 1935821 ACCATCGACAATGTCAAGAGCAAGATCCAGGATAAGGAGGGTATCCCTCCTGATCAACAG 1935880 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || || ||||| || ||||| || || |||||||| | || |||| | ||||| || | Sbjct 1935881 CGTCTCATCTTTGCTGGAAAGCAACTTGAAGATGGCCGTAC-CTTGTCTGATTACAATAT 1935939 Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129 |||||| ||||| ||||||||||| || Sbjct 1935940 CCAAAAGGAATCCACACTGCATCTGGT 1935966 Score = 120 bits (132), Expect = 7e-22 Identities = 148/200 (74%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || ||||| || || || || || |||||||||||| | || ||||| | Sbjct 1935540 TCGTCAAGACCCTCACTGGCAAGACCATTACTCTCGAGGTGGAATCCAGCGATACCATTG 1935599 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | ||||| || ||||| |||||||| || || |||||||| |||||||| || || | Sbjct 1935600 ATAACGTTAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTGA 1935659 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGTCCAAAAA 178109 | ||||| || || ||| | || ||||| | || |||| |||| |||||| | || || Sbjct 1935660 TTTTCGCTGGCAAGCAGTTGGAGGATGGCCGCAC-CTTGTCCGACTATAACATTCAGAAG 1935718 Query 178110 GAATCAACACTGCATCTTGT 178129 ||||| || || || || || Sbjct 1935719 GAATCGACTCTCCACCTCGT 1935738 >seq7 Length=1968185 Score = 102 bits (112), Expect = 2e-16 Identities = 115/153 (75%), Gaps = 6/153 (4%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || || || || || || || |||||||| || || ||| ||||| Sbjct 1069357 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGC---GACAC 1069413 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| |||||||| || || || || || |||||||| || Sbjct 1069414 CATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCAGCAGCG 1069473 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078 || |||||||| || || ||||| || ||||| Sbjct 1069474 CCTGATCTTCGCTGGTAAGCAGCTTGAGGATGG 1069506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730799007044