Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20lentulus_20[genbank_20GCA_5F001445615.1_202015-11-13] 19 sequences; 30,956,128 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq9 214 2e-50 >seq9 Length=3379558 Score = 214 bits (236), Expect = 2e-50 Identities = 589/897 (66%), Gaps = 8/897 (1%) Strand=Plus/Plus Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248 || |||||||| || |||||| ||| | ||| ||||| || || | | | | Sbjct 1042290 TCAAACTCGTCGCCATAAACATCTGCCAGGCCAGGGGCTTCATTGGGGCAGAATAGAGTC 1042349 Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63308 || || |||| || ||||| ||||| || |||||||| |||| ||||| || Sbjct 1042350 CAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGAGCGTAGAAC 1042409 Query 63309 AGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63368 ||||| | | ||| |||||| || || ||||| |||||| | |||| | | Sbjct 1042410 AGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAAGAACTCGAAG 1042469 Query 63369 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63428 | ||| | ||||| || || | ||| || || | | | ||||| || |||||||||||| Sbjct 1042470 ACATCGGCGTGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTGTTTCCTCCC 1042529 Query 63429 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63488 || || | |||| || ||||| || | || | | ||| |||| ||||||||| || Sbjct 1042530 TGGTCGACATATCGCGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAA 1042589 Query 63489 ATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCT 63548 ||| ||||| || || ||| || ||||||| || || || || Sbjct 1042590 GAACCGTTGGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACATTAAGGCCA 1042649 Query 63549 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCT 63608 || || || || | || ||||| | || || |||| ||||| ||||| || || Sbjct 1042650 ATACCGCCGGCGGTCTTCGAGATCATGGCACAAGTCTTTAGGGTGTCGTAGATACCCTCG 1042709 Query 63609 ATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCC 63668 |||||||| || |||| | | || || || | || ||| | | | ||| || Sbjct 1042710 ATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGCCAGCTGGGGCTGGGGAGTACCA 1042769 Query 63669 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 63728 ||||| || | ||||||||||| || || || |||| | || | |||| ||| ||| Sbjct 1042770 GCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGGGACATGAGATGGTAGGTC 1042829 Query 63729 TCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 63788 ||||| || || |||| | ||||| || || || ||||||||||||| |||| Sbjct 1042830 TCAATGGCCTTTTCGATATTGCTACCGTGAATGCCAACAGCAACACGCATTAACAAGTGC 1042889 Query 63789 TGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTA 63848 || || | ||| ||| ||| ||| ||| || || |||||| || | || || Sbjct 1042890 TGGGGACGCTCAGCAACCTTGCCGTTGATTCGCAGCAGGTAGGACCGCTCGAGTGTCTTG 1042949 Query 63849 AAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTAT 63906 || || ||| ||||||| ||||| || || ||||| | |||| | || ||||||| || Sbjct 1042950 AAGCCGAAAAAGTTGTAGTTGAAA--TCACGATCGTATACAATAGCAGAGTTGAGCTCAT 1043007 Query 63907 CCTTATATTTGTTAACTATATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCAT 63966 | || ||| | || || || || | || || || || | | | || | Sbjct 1043008 CAGCATGTTTCATGACAATTTCATACGTCTCTTTCGAGATCATTGGCGCGGGCTGCCTGT 1043067 Query 63967 TTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCA-CTA-AATAGtttttttGT 64024 | || || || ||||||| | | | |||| || || || | | || | || || || Sbjct 1043068 TCTTGGGGTTGACATAGTGGTAGAGATCCGAGATGAC--CAGCGAGAACTGCTTCTTGGT 1043125 Query 64025 TTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64081 || |||||| || || || | |||||| | ||| ||||| ||||||||||| || || Sbjct 1043126 TTGCTTGTGGAGGTTGGAAACGGCTATACGGGCAGCTAGGATGGCATAATCGGGGTG 1043182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817450418320