Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20lentulus_20[genbank_20GCA_5F001445615.1_202015-11-13] 19 sequences; 30,956,128 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq9 174 3e-38 seq12 154 3e-32 >seq9 Length=3379558 Score = 174 bits (192), Expect = 3e-38 Identities = 331/478 (69%), Gaps = 16/478 (3%) Strand=Plus/Plus Query 244970 GGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATC 245029 ||||| | ||| |||| || ||| | || || | || |||||| || || ||| || Sbjct 1042335 GGGCAGAATAGAGTCCAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTC 1042394 Query 245030 CAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGC--TCGTCCGAGCCAGTGTTCTTCCTCA 245087 || || || | ||| || || | || ||||| || ||| || |||||| | | Sbjct 1042395 CACAGAGCGTAGAACAGATCACGGG--CTCTGACTTCCTCCTTACCGTGGTTCTTGCGAA 1042452 Query 245088 GCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGG 245147 | ||||| || || ||||| ||| ||||||| ||||| | ||| | ||| | ||||| | Sbjct 1042453 GATCCAAGAACTCGAAGACATCGGCGTGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAG 1042512 Query 245148 GCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCG-AGCG-CGTTGAAGATGCGCAGGGT 245205 | |||||||| ||||||||||| | ||| || || || | |||||| | ||| || | Sbjct 1042513 GGCGCTTGTTTCCTCCCTGGTCGA-CAT-ATCGCGCAGTGTTGTTGAACACGCGAAGCAT 1042570 Query 245206 AGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAG 245265 || || || |||||||| ||||||||||| ||||||| ||| || | | | Sbjct 1042571 GGGAACAATACCGTTAGAAGAACCGTTGGTGCCACCAATGTAGGAGCCTGTGGCAC---G 1042627 Query 245266 GTTGCTGATGGACAT----GCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCT 245321 | ||| | || |||| ||| | ||||||||| ||| ||||| | ||| || ||| Sbjct 1042628 GATGC-GGTGAACATTAAGGCCAATACCGCCGGCGGTCTTCGAGATCATGGCACAAGTCT 1042686 Query 245322 TGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGG 245381 | | |||||| || ||||| ||||| ||| |||||| | || || ||||| || | Sbjct 1042687 TTAGGGTGTCGTAGATACCCTCGATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACG 1042746 Query 245382 ACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 ||||||||||| ||| | | | ||||||||||| || || || || ||||| Sbjct 1042747 CCAGCTGGGGCTGGGGAGTACCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTA 1042804 >seq12 Length=4166724 Score = 154 bits (170), Expect = 3e-32 Identities = 299/441 (68%), Gaps = 3/441 (1%) Strand=Plus/Minus Query 42705 CTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTC 42764 || || ||||| | || || ||||| || |||||||| || | || || ||||||||| Sbjct 3393474 CTTGTGGCCTTCGCTGCTGTGGAGGGAATTTTCTTCTCTGGATCTTTTGCTTCCATCTTC 3393415 Query 42765 TGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824 ||||| ||| || | | |||||| || || || ||||| ||||| |||||| | Sbjct 3393414 TGGCTGAAGAAGCGTGGATTGATGCCTGGTCTTACTTTCTCCAACGAGCTCATCTCTCGT 3393355 Query 42825 GACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAG 42884 |||||||| |||| | ||||||||| ||||| |||||||| ||| | | || Sbjct 3393354 GACGAGGGATTGCACACGGACTTTGCTTGCCTTCTGTTCTC---TCACTTGAACCATCGC 3393298 Query 42885 CCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTC 42944 ||| ||| || || || || ||| ||||| |||| ||||| |||||||| Sbjct 3393297 CCCGACAAGAAGGTTGTTGAGGATATTATCGTTGAGGCTGTGGCCATCGAACAGGAGTTC 3393238 Query 42945 CTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTAC 43004 | || | | || || || | || | ||||||||| | || |||||| ||||| Sbjct 3393237 TTGACAGACGCTCTTCCTGTTGCTCTCCTAGGCATGAACTCTAAGCTGATGTGCCAGTAC 3393178 Query 43005 ATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACAACACG 43064 || ||| ||| || || | || || | | || || ||||||| | Sbjct 3393177 ATTGAGTTCGTTGCTGATCGGCTGTTGGTCGCCCTCGGAAACAAGAAGTACTACAACTCT 3393118 Query 43065 CCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAG 43124 || |||||||||||| ||||| | |||||| | | || ||||||||||| || ||| Sbjct 3393117 CCCAACCCCTTCGACTTCATGGAAAGTATCTCGCTTGCAGGAAAGACCAACTTCTTTGAG 3393058 Query 43125 AAGCGCGTCGCCGACTACCAG 43145 ||||| || | ||||||||| Sbjct 3393057 AAGCGTGTTGGTGACTACCAG 3393037 Score = 114 bits (126), Expect = 2e-20 Identities = 201/288 (70%), Gaps = 5/288 (2%) Strand=Plus/Minus Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368 ||||||||||| || || ||| ||||||||||||||||||||| || |||| || Sbjct 3393924 ATGTACAAGAAAGCCGAGGCTTCCTTCTGGACCGCCGAGGAGATTGATCTCTCCAAAGAT 3393865 Query 42369 ACGGCCGGCTGGGAGTCACTGTCTGAGA-ACGAAAAGTTTTTCCTCAAAAA-CATA--CT 42424 | || |||| | || | |||| |||| || || | ||| ||| || Sbjct 3393864 CTGCACGACTGGAACA-ACCGCCTGAATGACGATGAGCGTTACTTCATCTCTCATGTCCT 3393806 Query 42425 GGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAA 42484 ||||||||||| ||||| ||||| || ||||||||||||||| | |||| || Sbjct 3393805 TGCCTTCTTCGCTGCCTCGGACGGTATCGTCAATGAGAACCTGCTGGAGCGCTTCAGCAA 3393746 Query 42485 AGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGT 42544 ||||||||| |||||| || |||||||||||||||||||| || |||||| | Sbjct 3393745 TGAGGTGCAGGTGCCTGAGGCTCGATGCTTCTACGGCTTCCAGATCATGATCGAGAACAT 3393686 Query 42545 GCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCC 42592 || || ||| ||| || ||| | | ||||||||| ||| || Sbjct 3393685 TCATTCGGAGACATACTCCTTGCTGATTGATACGTACATCAAGGAGCC 3393638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338975719440