Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20lentulus_20[genbank_20GCA_5F001445615.1_202015-11-13] 19 sequences; 30,956,128 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq16 107 6e-18 seq5 91.5 4e-13 >seq16 Length=4817265 Score = 107 bits (118), Expect = 6e-18 Identities = 108/140 (77%), Gaps = 3/140 (2%) Strand=Plus/Plus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| |||||||| |||| ||||| ||| |||| ||||||||| Sbjct 1031721 AGAATTTCCTTGAGACGAGGAACACCGAGGGTGACGTT---CTTCGACGAGACACCAGCA 1031777 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 |||||||| || |||| || | || |||| |||||||||||| || || |||| | Sbjct 1031778 AAGTGGAACGTGTTCAAGGTCATCTGTGTAGCGGGCTCACCAATAGACTGAGCGGCAAGC 1031837 Query 301933 ATACCAACCATTTCTCCTGG 301952 | |||||||||||| ||||| Sbjct 1031838 ACACCAACCATTTCACCTGG 1031857 >seq5 Length=1893247 Score = 91.5 bits (100), Expect = 4e-13 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 |||||||| | ||||||||||||||| ||||| || |||||||| |||||||| || || Sbjct 562781 GCACCGTGCGCAATCATACAATCACGTTCCATCTCTCCGAAACGCAGACCACCGTCACGG 562722 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGA 251574 || ||||| || ||||||| || || ||| Sbjct 562721 GCTCTACCTTCCACAGGCTGCCGGGTCAGA 562692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817241704403