Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20luchuensis_20[genbank_20GCA_5F001602395.1_202016-03-
01] 44 sequences; 34,183,795 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq2 98.7 8e-16
seq23 96.9 3e-15
seq3 84.2 2e-11
>seq2
Length=2459003
Score = 98.7 bits (108), Expect = 8e-16
Identities = 99/129 (77%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 23811 GTTGCCCAGGTCGCCGACGTGTCGCTCCGCGGCGTCGGGCGCGCCGTGTCTCTGGCGGGT 23870
|||||| ||||| || ||||| ||||| || | ||||| || ||||| ||| || |
Sbjct 820068 GTTGCCAAGGTCACCAACGTGACGCTCGTCGTCCTCGGGAGCACCGTGGGTCTTGCCGAA 820127
Query 23871 GGGGTTAAAGTGCTCGCCAGCGGACGTGCAGCCGTTGCTGGTGTCGCCGAATTCGTGCAC 23930
|||||| ||||| |||||||| |||||||||||| || |||| ||||| | ||| ||
Sbjct 820128 GGGGTTGAAGTGAGGACCAGCGGAGGTGCAGCCGTTGGTGTTGTCACCGAACTGGTGGAC 820187
Query 23931 GTGAAAACC 23939
||| || ||
Sbjct 820188 GTGGAAGCC 820196
>seq23
Length=2392584
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004
|||||| || || || | |||||||| |||| |||| |||||| || ||||| |||||
Sbjct 1623826 GTTTCCACCACGGAGACGGAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTC 1623885
Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064
| || || | | || |||||||| || || || |||| || | |||||| |||
Sbjct 1623886 GGAGAGCGTACGTCCATCTTCCAGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCCGG 1623945
Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124
||| | ||| ||||| || |||||| | || || | | | |||||| | |||
Sbjct 1623946 GGGAATGCCCTCCTTATCTTGGATCTTGTTCTTGACGTTATCAATAGTATCCGAGCTCTC 1624005
Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
| || | ||||| ||||||||||| | || || || || || |||||
Sbjct 1624006 CACCTCTAGCGTAATCGTCTTGCCGGTGAGTGTCTTCACGAAGATCTGCAT 1624056
Score = 96.9 bits (106), Expect = 3e-15
Identities = 133/186 (72%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 20978 AGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCC 21037
|||||| |||||||| ||||| ||||| | |||||| || | ||||||||||| || ||
Sbjct 1624315 AGTGGATTCCTTTTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTTCC 1624374
Query 21038 CGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097
||| | || || | ||||||||| || | ||| |||||||| ||||| ||
Sbjct 1624375 CGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTGGTCTT 1624434
Query 21098 CACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGT 21157
||| | | ||| ||| ||| | |||| || | ||| || ||||| ||||| | ||
Sbjct 1624435 CACATTGTCGATAGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTTCCGGTCAGGGT 1624494
Query 21158 TTTGAC 21163
|||||
Sbjct 1624495 CTTGAC 1624500
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || ||||| | ||| || | || | ||| |||||||| || ||||| ||||| | |
Sbjct 1624588 CCACCACGCAGGCGGAGAACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGAC 1624647
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| || | ||||||||||| || || || | || || | ||||||||| ||
Sbjct 1624648 AGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCGGGAGGG 1624707
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| |||||||| |||||| || || | | ||| ||||| | | |||
Sbjct 1624708 ATGCCCTCCTTGTCCTGGATCTTGGTCTTAACGTTGTCGATGGTATCGCTCGACTCGACC 1624767
Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151
|| | ||| ||||||||||||||
Sbjct 1624768 TCGAGGGTGATGGTCTTGCCGGT 1624790
>seq3
Length=3509466
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || ||||| | |||||||| || | ||||||||||| || ||||| |||||||
Sbjct 1529192 CCACCACGCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 1529133
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || || ||||||| ||||| || || || | || || | ||||||||| |||
Sbjct 1529132 AGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCGGGGGGG 1529073
Query 21069 ACGCCTTCCTTGTC 21082
| || ||||||||
Sbjct 1529072 ATACCCTCCTTGTC 1529059
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422258973563504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |