Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20luchuensis_20[genbank_20GCA_5F001602395.1_202016-03- 01] 44 sequences; 34,183,795 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq2 98.7 8e-16 seq23 96.9 3e-15 seq3 84.2 2e-11 >seq2 Length=2459003 Score = 98.7 bits (108), Expect = 8e-16 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 23811 GTTGCCCAGGTCGCCGACGTGTCGCTCCGCGGCGTCGGGCGCGCCGTGTCTCTGGCGGGT 23870 |||||| ||||| || ||||| ||||| || | ||||| || ||||| ||| || | Sbjct 820068 GTTGCCAAGGTCACCAACGTGACGCTCGTCGTCCTCGGGAGCACCGTGGGTCTTGCCGAA 820127 Query 23871 GGGGTTAAAGTGCTCGCCAGCGGACGTGCAGCCGTTGCTGGTGTCGCCGAATTCGTGCAC 23930 |||||| ||||| |||||||| |||||||||||| || |||| ||||| | ||| || Sbjct 820128 GGGGTTGAAGTGAGGACCAGCGGAGGTGCAGCCGTTGGTGTTGTCACCGAACTGGTGGAC 820187 Query 23931 GTGAAAACC 23939 ||| || || Sbjct 820188 GTGGAAGCC 820196 >seq23 Length=2392584 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 |||||| || || || | |||||||| |||| |||| |||||| || ||||| ||||| Sbjct 1623826 GTTTCCACCACGGAGACGGAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTC 1623885 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 | || || | | || |||||||| || || || |||| || | |||||| ||| Sbjct 1623886 GGAGAGCGTACGTCCATCTTCCAGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCCGG 1623945 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 ||| | ||| ||||| || |||||| | || || | | | |||||| | ||| Sbjct 1623946 GGGAATGCCCTCCTTATCTTGGATCTTGTTCTTGACGTTATCAATAGTATCCGAGCTCTC 1624005 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 | || | ||||| ||||||||||| | || || || || || ||||| Sbjct 1624006 CACCTCTAGCGTAATCGTCTTGCCGGTGAGTGTCTTCACGAAGATCTGCAT 1624056 Score = 96.9 bits (106), Expect = 3e-15 Identities = 133/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 20978 AGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCC 21037 |||||| |||||||| ||||| ||||| | |||||| || | ||||||||||| || || Sbjct 1624315 AGTGGATTCCTTTTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTTCC 1624374 Query 21038 CGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097 ||| | || || | ||||||||| || | ||| |||||||| ||||| || Sbjct 1624375 CGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTGGTCTT 1624434 Query 21098 CACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGT 21157 ||| | | ||| ||| ||| | |||| || | ||| || ||||| ||||| | || Sbjct 1624435 CACATTGTCGATAGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTTCCGGTCAGGGT 1624494 Query 21158 TTTGAC 21163 ||||| Sbjct 1624495 CTTGAC 1624500 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||| || | || | ||| |||||||| || ||||| ||||| | | Sbjct 1624588 CCACCACGCAGGCGGAGAACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGAC 1624647 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | ||||||||||| || || || | || || | ||||||||| || Sbjct 1624648 AGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCGGGAGGG 1624707 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| || || | | ||| ||||| | | ||| Sbjct 1624708 ATGCCCTCCTTGTCCTGGATCTTGGTCTTAACGTTGTCGATGGTATCGCTCGACTCGACC 1624767 Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151 || | ||| |||||||||||||| Sbjct 1624768 TCGAGGGTGATGGTCTTGCCGGT 1624790 >seq3 Length=3509466 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | |||||||| || | ||||||||||| || ||||| ||||||| Sbjct 1529192 CCACCACGCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 1529133 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || ||||||| ||||| || || || | || || | ||||||||| ||| Sbjct 1529132 AGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCGGGGGGG 1529073 Query 21069 ACGCCTTCCTTGTC 21082 | || |||||||| Sbjct 1529072 ATACCCTCCTTGTC 1529059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422258973563504