Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20luchuensis_20[genbank_20GCA_5F001602395.1_202016-03-
01] 44 sequences; 34,183,795 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq17 141 1e-28
>seq17
Length=842982
Score = 141 bits (156), Expect = 1e-28
Identities = 297/435 (68%), Gaps = 21/435 (5%)
Strand=Plus/Minus
Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486
|| || || ||||| ||||| ||||| || ||||| || ||| || || |||||||
Sbjct 110544 CTCGTTGCTTTCGCTGCCGTGGAGGGTATTTTCTTCTCCGGTTCCTTCGCTTCCATCTTC 110485
Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546
|||||||||||||| || |||||||| || ||||| | |||||| | || |||||
Sbjct 110484 TGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGT 110425
Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT-ATCTGCGTCCCG 125604
|| ||||| || ||| ||||| ||| || |||| || || || | | | |||
Sbjct 110424 GATGAGGGTCTGCACACCGACTTCGCCTGCCTGTTGTTCTCCCACCTGAACAACCGCCCC 110365
Query 125605 AGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAAC 125664
|| | ||| | || ||| ||||| | | ||| ||||| | || || |
Sbjct 110364 AG----CAAGCAG-GTTGTTGAGGACATCATCGT------CGAGGCCGTCGGCATTGAGC 110316
Query 125665 AAGAGTTTCTAACCGAATCCCTACCGGTCAGC-ATGATTGGCATGAACTGCAAGCTAATG 125723
| ||||| || || || | || || | || || | |||||||||| ||||| |||
Sbjct 110315 AGGAGTTCCTGACTGACGCTCTGCC-CTGTGCTCTGCTGGGCATGAACTCTAAGCTGATG 110257
Query 125724 TGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA-- 125781
||| ||||||| ||||| || || || || |||| | | ||||| |||||
Sbjct 110256 TGCCAGTACATCGAGTTCGTCGCGGACCG---CCTGTTGGTGGCCCTTGGCAACAAGAAG 110200
Query 125782 -TTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACC 125840
|||||||||| ||| ||||| || |||||| || || || | ||||||||||
Sbjct 110199 TACTACAACGCCACGAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACC 110140
Query 125841 AACTTTTTCGAGAAG 125855
||||| || ||||||
Sbjct 110139 AACTTCTTTGAGAAG 110125
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058792417440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |