Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20luchuensis_20[genbank_20GCA_5F001602395.1_202016-03- 01] 44 sequences; 34,183,795 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq18 140 2e-28 seq33 125 5e-24 seq23 91.5 1e-13 >seq18 Length=1122175 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 729826 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 729885 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 729886 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 729920 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 737878 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 737937 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 737938 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 737972 >seq33 Length=1024138 Score = 125 bits (138), Expect = 5e-24 Identities = 200/287 (70%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATT 6260 |||||||| ||||| ||| |||| || ||||| ||||||| ||||| |||||||| Sbjct 485804 TTCTACCGTTACAAGATGGAGCGCCTCCAGTCCAAGATCGAGGGCAAGGGCAACGGTATC 485745 Query 6261 AAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTAC 6320 || ||||| |||||||| || |||||| || ||||| | |||||| | | ||| Sbjct 485744 AAGACCGTTGTTGTCAACTTGAACTCGGTCGCTCAGTCGCTCAGTCGCCCTCCGTCTTAC 485685 Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380 || || || || || | || || || |||||| | | | | || | || Sbjct 485684 GTGATCAAGTACTTTGGCTTTGAGCTGGGTGCTCAGGCCAACGCCAAGCCCACTGATGAT 485625 Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTT 6440 |||| ||| ||||||| | ||| | | ||||||| ||||||| || ||||||||| Sbjct 485624 CGCTGGATCATTAACGGTGCCCATGATGCCCCCAAGCTTCAGGACTATCTGGACGGCTTT 485565 Query 6441 ATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 || |||||| |||||||| | ||||| | || ||||| || || Sbjct 485564 ATCTCCAAGTTCGTGCTGTGCAAGAAATGCAAGAATCCGGAAACGGA 485518 >seq23 Length=2392584 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 38088 TTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCA 38147 || ||||| | | ||| | |||||| || |||||||||||||| || || ||||| || Sbjct 1623827 TTTCCACCACGGAGACGGAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCG 1623886 Query 38148 GACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAG 38207 || | |||| | || || | || || || || || || || || || ||||| | | Sbjct 1623887 GAGAGCGTACGTCCATCTTCCAGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCCGGG 1623946 Query 38208 GGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCA 38267 || | ||| || || || || || | ||| || || | | |||||| || || Sbjct 1623947 GGAATGCCCTCCTTATCTTGGATCTTGTTCTTGACGTTATCAATAGTATCCGAGCTCTCC 1624006 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || |||| ||||| || || || || | || |||||||| |||||||| Sbjct 1624007 ACCTCTAGCGTAATCGTCTTGCCGGTGAGTGTCTTCACGAAGATCTGCAT 1624056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334947020384564